Heart failure (HF) is a complex and prevalent condition, particularly in the elderly, presenting symptoms like chest tightness, shortness of breath, and dyspnea. The study aimed to improve the classification of HF subtypes and identify potential drug targets by exploring the role of Immunogenic Cell Death (ICD), a process known for its role in tumor immunity but underexplored in HF research. Additionally, the study sought to apply deep learning models to enhance HF classification and identify diagnosis-related genes. Various deep learning encoder models were employed to evaluate their effectiveness in clustering HF based on ICD-related genes. Identified HF subtypes were further refined using differentially expressed genes, allowing for the assessment of immune infiltration and functional enrichment. Advanced machine learning techniques were used to identify diagnosis-related genes, and these genes were used to construct nomogram models. The study also explored gene interactions with miRNA and transcription factors. Distinct HF subtypes were identified through clustering based on ICD-related genes. Differentially expressed genes revealed significant variations in immune infiltration and functional enrichment across these subtypes. The diagnostic model showed excellent performance, with an AUC exceeding 0.99 in both internal and external test sets. Diagnosis-related genes were also identified, serving as the foundation for nomogram models and further exploration of their regulatory interactions. This study provides a novel insight into HF by combining the exploration of ICD, the application of deep learning models, and the identification of diagnosis-related genes. These findings contribute to a deeper understanding of HF subtypes and highlight potential therapeutic targets for improving HF classification and treatment.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11829947PMC
http://dx.doi.org/10.1038/s41598-025-89333-1DOI Listing

Publication Analysis

Top Keywords

deep learning
16
diagnosis-related genes
16
genes
10
immunogenic cell
8
heart failure
8
learning models
8
identify diagnosis-related
8
clustering based
8
based icd-related
8
icd-related genes
8

Similar Publications

Exploring the Role of Immersive Virtual Reality Simulation in Health Professions Education: Thematic Analysis.

JMIR Med Educ

March 2025

Division of Pulmonary, Critical Care, & Sleep Medicine, Department of Medicine, NYU Grossman School of Medicine, 550 First Avenue, 15th Floor, Medical ICU, New York, NY, 10016, United States, 1 2122635800.

Background: Although technology is rapidly advancing in immersive virtual reality (VR) simulation, there is a paucity of literature to guide its implementation into health professions education, and there are no described best practices for the development of this evolving technology.

Objective: We conducted a qualitative study using semistructured interviews with early adopters of immersive VR simulation technology to investigate use and motivations behind using this technology in educational practice, and to identify the educational needs that this technology can address.

Methods: We conducted 16 interviews with VR early adopters.

View Article and Find Full Text PDF

Objectives: To develop a deep learning (DL) model based on ultrasound (US) images of lymph nodes for predicting cervical lymph node metastasis (CLNM) in postoperative patients with differentiated thyroid carcinoma (DTC).

Methods: Retrospective collection of 352 lymph nodes from 330 patients with cytopathology findings between June 2021 and December 2023 at our institution. The database was randomly divided into the training and test cohort at an 8:2 ratio.

View Article and Find Full Text PDF

Brain age gap (BAG), the deviation between estimated brain age and chronological age, is a promising marker of brain health. However, the genetic architecture and reliable targets for brain aging remains poorly understood. In this study, we estimate magnetic resonance imaging (MRI)-based brain age using deep learning models trained on the UK Biobank and validated with three external datasets.

View Article and Find Full Text PDF

There is great interest in using genetically tractable organisms such as to gain insights into the regulation and function of sleep. However, sleep phenotyping in has largely relied on simple measures of locomotor inactivity. Here, we present FlyVISTA, a machine learning platform to perform deep phenotyping of sleep in flies.

View Article and Find Full Text PDF

We use a combination of Brownian dynamics (BD) simulation results and deep learning (DL) strategies for the rapid identification of large structural changes caused by missense mutations in intrinsically disordered proteins (IDPs). We used ∼6500 IDP sequences from MobiDB database of length 20-300 to obtain gyration radii from BD simulation on a coarse-grained single-bead amino acid model (HPS2 model) used by us and others [Dignon, G. L.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!