Proteins containing prion-like low complexity domains (PLDs) are common drivers of the formation of biomolecular condensates and are prone to misregulation due to amino acid mutations. Here, we exploit the accuracy of our residue-resolution coarse-grained model, Mpipi, to quantify the impact of amino acid mutations on the stability of 140 PLD mutants from six proteins (hnRNPA1, TDP43, FUS, EWSR1, RBM14, and TIA1). Our simulations reveal the existence of scaling laws that quantify the range of change in the critical solution temperature of PLDs as a function of the number and type of amino acid sequence mutations. These rules are consistent with the physicochemical properties of the mutations and extend across the entire family tested, suggesting that scaling laws can be used as tools to predict changes in the stability of PLD condensates. Our work offers a quantitative lens into how the emergent behavior of PLD solutions vary in response to physicochemical changes of single PLD molecules.
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http://dx.doi.org/10.7554/eLife.99068 | DOI Listing |
J Patient Rep Outcomes
March 2025
Department of Psychiatry, University of Toronto, 27 King's College Circle, Toronto,, ON M5S, Canada.
Background: This study was designed to evaluate content validity of the Dimensional Anhedonia Rating Scale (DARS), a patient-reported outcome measure, in adults with anhedonia in the context of major depressive disorder (MDD). To accomplish this, a conceptual model including the symptoms and impacts of anhedonia in the context of MDD was developed and refined through a targeted literature review, clinician interviews (N = 6), and participant interviews (N = 20).
Results: Using the final conceptual model, an item mapping exercise was conducted for the DARS, demonstrating that it provided suitable concept coverage in this population.
JAMA Netw Open
March 2025
Department of Emergency Medicine, School of Medicine, University of Washington, Seattle.
Importance: Flooding is a major environmental hazard, with events increasing in intensity and frequency in the context of climate change. Floods cause significant health and economic impacts, particularly among vulnerable populations, including older adults. However, comprehensive analyses of the health consequences of flooding remain limited.
View Article and Find Full Text PDFJ Chem Phys
March 2025
Freie Universität Berlin, Fachbereich Mathematik und Informatik, Arnimallee 6, 14195 Berlin, Germany.
Non-equilibrium molecular dynamics (NEMD) simulations of fluid flow have highlighted the peculiarities of nanoscale flows compared to classical fluid mechanics; in particular, boundary conditions can deviate from the no-slip behavior at macroscopic scales. For fluid flow in slit-shaped nanopores, we demonstrate that surface morphology provides an efficient control on the slip length, which approaches zero when matching the molecular structures of the pore wall and the fluid. Using boundary-driven, energy-conserving NEMD simulations with a pump-like driving mechanism, we examine two types of pore walls-mimicking a crystalline and an amorphous material-that exhibit markedly different surface resistances to flow.
View Article and Find Full Text PDFJ Transl Med
March 2025
Humanistic Care and Health Management Innovation Center, School of Nursing, Hebei Medical University, 361 East Zhongshan Road, Shijiazhuang, 050017, Hebei, China.
Background: Postpartum depression (PPD) is a significant public health issue. This study aimed to develop and validate machine learning (ML) models using biopsychosocial predictors to predict the risk of PPD for perinatal women and to provide several risk assessment tools for the early detection of PPD.
Methods: Candidate predictors, including history of mental illness and demographic, psychosocial, and physiological factors, were obtained from 1138 perinatal women between August 2021 and August 2022.
Phys Rev Lett
February 2025
Service de Physique de l'Etat Condensé, Université Paris-Saclay, CNRS, CEA, 91191 Gif-sur-Yvette, France.
The scale-invariant inverse energy cascade is a hallmark of 2D turbulence, with its theoretical energy spectrum observed in both direct numerical simulations (DNS) and laboratory experiments. Under this scale-invariance assumption, the effective diffusivity of a 2D turbulent flow is dimensionally controlled by the energy flux and the friction coefficient only. Surprisingly, however, we show that such scaling predictions are invalidated by numerical solutions of the 2D Navier-Stokes equation forced at intermediate wave number and damped by weak linear or quadratic drag.
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