Rationale And Objectives: This study aims to develop and validate an ultrasoundbased habitat imaging and peritumoral radiomics model for predicting high-risk capsule characteristics for recurrence of pleomorphic adenoma (PA) of the parotid gland while also exploring the optimal range of peritumoral region.
Materials And Methods: Retrospective analysis was conducted on 325 patients (171 in training set, 74 in validation set and 80 in testing set) diagnosed with PA at two medical centers. Univariate and multivariate logistic regression analyses were performed to identify clinical risk factors. The tumor was segmented into four habitat subregions using K-means clustering, with peri-tumor regions expanded at thicknesses of 1/3/5mm. Radiomics features were extracted from intra-tumor, habitat subregions, and peritumoral regions respectively to construct predictive models, integrating three machine learning classifiers: SVM, RandomForest, and XGBoost. Additionally, a combined model was developed by incorporating peritumoral features and clinical factors based on habitat imaging. Model performance was evaluated using receiver operating characteristic (ROC) curves, calibration curves, and decision curve analysis (DCA). SHAP analysis was employed to improve the interpretability.
Results: The RandomForest model in habitat imaging consistently outperformed other models in predictive performance, with AUC values of 0.881, 0.823, and 0.823 for the training set, validation set, and testing set respectively. Incorporating peri-1mm features and clinical factors into the combined model slightly improved its performance, resulting in AUC values of 0.898, 0.833, and 0.829 for each set. The calibration curves and DCA exhibited excellent fit for the combined model while providing great clinical net benefit.
Conclusion: The combined model exhibits robust predictive performance in identifying high-risk capsule characteristics for recurrence of PA in the parotid gland. This model may assist in determining optimal surgical margin and assessing patients' prognosis.
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http://dx.doi.org/10.1016/j.acra.2025.01.030 | DOI Listing |
Proc Biol Sci
March 2025
Marine Science Program, Biological and Environmental Science and Engineering Division (BESE), King Abdullah University of Science and Technology, Thuwal, Saudi Arabia.
Fluorescence is a notable adaptation in marine environments, helping to counteract the loss of longer wavelengths as light diminishes with depth. Studied to some extent in cnidarians and reef fish, its presence and functions in crustaceans are less understood. Recently, fluorescence was discovered in gall crabs (Cryptochiridae).
View Article and Find Full Text PDFBioinformatics
March 2025
Xi'an University, Xi'an, China.
Motivation: The BioArchLinux project was initiated to address challenges in bioinformatics software reproducibility and freshness. Relying on Arch Linux's user-driven ecosystem, we aim to create a comprehensive and continuously updated repository for life sciences research.
Results: BioArchLinux provides a PKGBUILD-based system for seamless software packaging and maintenance, enabling users to access the latest bioinformatics tools across multiple programming languages.
PeerJ
March 2025
Xinjiang Laboratory of Lake Environment and Resources in Arid Zone, Urumqi, Xinjiang Uygur Autonomous Region, China.
is an essential species within the Central Asian desert ecosystem, with its aboveground biomass (AGB) serving as a crucial marker of ecosystem health and desertification levels. Precise and effective methods for predicting AGB are vital for understanding the spatial distributions and ecological roles of desert regions. However, the low vegetation cover in these areas poses significant challenges for satellite-based research.
View Article and Find Full Text PDFSci Rep
March 2025
Department of Nuclear Medicine, Ewha Womans University Mokdong Hospital, Ewha Womans University College of Medicine, 1071 Anyangcheon‑ro, Yangcheon‑gu, Seoul, 07985, Republic of Korea.
Breast cancer occurs at a younger age compared to western countries in South Korea. Despite advancements in treatment methods such as targeted therapy and immunotherapy, the increasing number of patients underscores the importance of improving disease-free survival (DFS). In this study, we evaluated the associations between gut microbiota composition, inflammatory cytokine levels, and breast cancer recurrence in preoperative patients.
View Article and Find Full Text PDFFront Artif Intell
February 2025
School of Computer Science and Engineering, Vellore Institute of Technology, Vellore, Tamil Nadu, India.
Accurate identification of bird species is essential for monitoring biodiversity, analyzing ecological patterns, assessing population health, and guiding conservation efforts. Birds serve as vital indicators of environmental change, making species identification critical for habitat protection and understanding ecosystem dynamics. With over 1,300 species, India's avifauna presents significant challenges due to morphological and acoustic similarities among species.
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