Herbaspirillum species are typically isolated from plants and are known for their role in crop nitrogen fixation. Recently, they have been found to colonize humans and cause infections. This study aimed to identify and characterize two Herbaspirillum huttiense strains (CLJ01 and CLJ02) isolated from the blood of a uremic patient, with a focus on evaluating their pathogenicity and antibiotic efficacy. The strains were identified using the VITEK2 system, Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry , and 16S rRNA gene sequencing, confirming their identity as H. huttiense. High-throughput sequencing further revealed the presence of the resistance gene arnA, which confers resistance to polymyxin. For the first time, the pathogenicity of H. huttiense was assessed using a Galleria mellonella infection model. The results demonstrated a concentration-dependent virulence, with CLJ01 exhibiting slightly higher pathogenicity. Additionally, meropenem showed significant antimicrobial efficacy in the G. mellonella infection model, particularly under conditions of high bacterial load, indicating strong therapeutic potential. In conclusion, this study provides experimental evidence supporting the correct diagnosis and treatment of H. huttiense infections. Furthermore, the findings underscore the importance of accurately identifying rare pathogens in clinical settings for effective treatment.

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http://dx.doi.org/10.1093/lambio/ovaf012DOI Listing

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Herbaspirillum species are typically isolated from plants and are known for their role in crop nitrogen fixation. Recently, they have been found to colonize humans and cause infections. This study aimed to identify and characterize two Herbaspirillum huttiense strains (CLJ01 and CLJ02) isolated from the blood of a uremic patient, with a focus on evaluating their pathogenicity and antibiotic efficacy.

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Crystal structure of L-2-keto-3-deoxyrhamnonate 4-dehydrogenase involved in the non-phosphorylating pathway of L-rhamnose metabolism by bacteria.

Biosci Biotechnol Biochem

February 2025

Department of Bioscience, Graduate School of Agriculture, Ehime University, Matsuyama, Ehime, Japan.

In the non-phosphorylative L-rhamnose and L-fucose pathways in bacteria, the C4-OH groups of the L-2-keto-3-deoxyrhamnonate (L-KDR) and L-2-keto-3-deoxyfuconate (L-KDF) intermediates are oxidized by different NAD+-dependent dehydrogenases, which belong to the same superfamily; L-KDRDH and L-KDFDH, respectively. To further elucidate their opposite stereospecificities, we herein investigated the crystal structures of L-KDRDH (from Herbaspirillum huttiense) in ligand-free and NAD+-bound forms. The interactions between the side chains of Asp39 and Gln18, and the 2'- and/or 3'-hydroxyl group(s) of NAD+ were consistent with strict specificity for NAD+.

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The genus comprises 13 species, the majority of which are plant colonizers. However, some species are occasionally isolated from environmental sources, including water and polluted soil, while others are opportunistic human pathogens. Four novel bacterial strains were isolated from diseased foliage of tomato and Boston fern in Florida, USA.

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Bacterial consortium amendment effectively reduces Pb/Cd bioavailability in soil and their accumulation in wheat.

J Environ Manage

November 2024

State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, China; College of Resources and Environmental Engineering, Wuhan University of Technology, Wuhan, 430070, China; CAS Center for Excellence in Quaternary Science and Global Change, Xi'an, 710061, China. Electronic address:

Microbial remediation can maintain the sustainability of farmlands contaminated with heavy metals (HMs). However, the effects of bacterial consortium on crop growth and potential risks under HM stress, as well as its mechanisms, are still unclear compared with a single microorganism. Here, we investigated the effect of a bacterial consortium consisting of some HMs-resistant bacteria, including Bacillus cereus, Bacillus thuringiensis, and Herbaspirillum huttiense, on plant growth promotion and inhibition of Pb/Cd accumulation within different contaminated soil-wheat systems through pot experiments.

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Article Synopsis
  • Herbaspirillum spp. is a bacterium typically found in environments like soil and water, and is rarely linked to infections, especially in healthy individuals.
  • A 57-year-old male with no neutropenia experienced symptoms like fever and malaise after undergoing home dialysis, leading to the discovery of Herbaspirillum huttiense in his blood cultures.
  • After treating him with various antibiotics and removing his central line, he recovered without complications, raising the significance of this rare infection in a non-neutropenic dialysis patient.
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