Introduction: Due to its favorable traits-such as lower lignin content, higher oil concentration, and increased protein levels-the genetic improvement of yellow-seeded rapeseed has attracted more attention than other rapeseed color variations. Traditionally, yellow-seeded rapeseed has been identified visually, but the complex variability in the seed coat color of has made manual identification challenging and often inaccurate. Another method, using the RGB color system, is frequently employed but is sensitive to photographic conditions, including lighting and camera settings.
Methods: We present four data-driven models to identify yellow-seeded using hyperspectral features combined with simple yet intelligent techniques. One model employs partial least squares regression (PLSR) to predict the R, G, and B color channels, effectively distinguishing yellow-seeded varieties from others according to globally accepted yellow-seed classification protocols. Another model uses logistic regression (Logit-R) to produce a probability-based assessment of yellow-seeded status. Additionally, we implement two intelligent models, random forest and support vector classifier to evaluate features selected through lasso-penalized logistic regression.
Results And Discussion: Our findings indicate significant recognition accuracies of 96.55% and 98% for the PLSR and Logit-R models, respectively, aligning closely with the accuracy of previous methods. This approach represents a meaningful advancement in identifying yellow-seeded rapeseed, with high recognition accuracy demonstrating the practical applicability of these models.
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http://dx.doi.org/10.3389/fgene.2024.1518205 | DOI Listing |
Front Genet
January 2025
School of Mathematics and Physics, The University of Queensland, Brisbane, QLD, Australia.
Introduction: Due to its favorable traits-such as lower lignin content, higher oil concentration, and increased protein levels-the genetic improvement of yellow-seeded rapeseed has attracted more attention than other rapeseed color variations. Traditionally, yellow-seeded rapeseed has been identified visually, but the complex variability in the seed coat color of has made manual identification challenging and often inaccurate. Another method, using the RGB color system, is frequently employed but is sensitive to photographic conditions, including lighting and camera settings.
View Article and Find Full Text PDFFront Plant Sci
April 2024
Qinghai University, Academy of Agriculture and Forestry Sciences of Qinghai Province, Laboratory of Research and Utilization of Germplasm Resources in Qinghai-Tibet Plateau, Qinghai, Xining, China.
Introduction: Seed coat color is a significant agronomic trait in horticultural crops such as which is characterized by brown or yellow seed coat coloration. Previous studies have shown that is responsible for seed coat proanthocyanidin formation, which is dependent on the MYB-bHLH-WD40 complex, whereas some studies have reported that TRANSPARENT TESTA GLABRA 1 (TTG1) directly interacts with the structural gene promoters of the flavonoid pathway.
Methods: Herein, the brown-seeded inbred B147 and ttg1 yellow-seeded inbred B80 mutants were used as plant materials for gene expression level analysis, gene promoter clone and transient overexpression.
Plants (Basel)
March 2024
College of Agronomy, Northwest A&F University, Taicheng Road 3, Yangling 712100, China.
α-Linolenic acid (ALA) is an important nutrient component in rapeseed oil, and rapeseed breeders want to either restrain or enhance the function of fatty acid desaturases (FADs) in the ALA biosynthesis pathway. To determine the reason for the upregulation of rapeseed genes in two high-ALA accessions, R8Q10 and YH25005, we compared their transcriptome profiles in the seed at 24 days after pollination (DAP) with those of two low-ALA lines, A28 and SW. The expression levels of twenty-eight important genes in the seed samples at 20, 27, and 34 DAP were also investigated using an RT-qPCR.
View Article and Find Full Text PDFInt J Mol Sci
January 2024
State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, Xianyang 712100, China.
Yellow seed breeding is an effective method to improve oil yield and quality in rapeseed ( L.). However, naturally occurring yellow-seeded genotypes have not been identified in Mustard ( L.
View Article and Find Full Text PDFPlant Physiol Biochem
January 2024
Oil Crops Research Institute of Chinese Academy of Agricultural Sciences/Key Laboratory for Biological Sciences and Genetic Improvement of Oil Crops, Ministry of Agriculture and Rural Affairs, Wuhan, 430062, China; Hubei Hongshan Laboratory, Wuhan, China. Electronic address:
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