sp. nov., isolated from tree bark ( Chev.) and its antioxidant activity.

Int J Syst Evol Microbiol

Department of Biochemistry and Microbiology, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok 10330, Thailand.

Published: January 2025

A Gram-stain-positive, facultatively anaerobic, rod-shaped strain, designated SPB1-3, was isolated from tree bark. This strain exhibited heterofermentative production of dl-lactic acid from glucose. Optimal growth was observed at 25-40 °C, pH 4.0-7.0, and in the presence of 3% (w/v) NaCl. The cell wall peptidoglycan contained lysine and aspartic acid. The predominant fatty acids identified were C and the Summed feature 7 (C 7c/C c and/or C 6c/7c/19cy). The polar lipid profile included phosphatidylglycerol, diphosphatidylglycerol and phosphatidylinositol, along with two unidentified phospholipids, two unidentified amino lipids and two unidentified lipids. Phylogenetic analysis based on 16S rRNA gene sequences positioned strain SPB1-3 within the genus , showing a close relation to NBRC 111893 (99.86%) and CCTCC M 2011381 (98.65%). The whole genome of strain SPB1-3 comprised 1 932 998 base pairs with 1955 coding genes and a DNA G+C content of 37.8%. Digital DNA-DNA hybridization between strain SPB1-3 and closely related type strains ranged from 19.50 to 27.20%. The average nucleotide identity ranged from 84.21 to 85.56%, and the average amino acid identity ranged from 57.25 to 85.99%, both falling below the established thresholds for species delineation. Strain SPB1-3 was clearly distinguishable from related species based on its phenotypic and chemotaxonomic characteristics, 16S rRNA gene sequence similarity and whole genome analysis. Additionally, the strain exhibited radical scavenging activity at 66.92% and demonstrated 82.32% inhibition in the tyrosinase inhibitory assay. These findings support the classification of strain SPB1-3 as a novel species within the genus , for which the name sp. nov. is proposed. The type strain is SPB1-3 (=JCM 35081=TISTR 10005).

Download full-text PDF

Source
http://dx.doi.org/10.1099/ijsem.0.006649DOI Listing

Publication Analysis

Top Keywords

strain spb1-3
24
strain
9
isolated tree
8
tree bark
8
strain exhibited
8
16s rrna
8
rrna gene
8
identity ranged
8
spb1-3
7
nov isolated
4

Similar Publications

Generic Elasticity of Thermal, Underconstrained Systems.

Phys Rev Lett

December 2024

CPT, CNRS, Aix Marseille Univ, Université de Toulon, (UMR 7332), Turing Center for Living Systems, Marseille, France.

Athermal (i.e., zero-temperature) underconstrained systems are typically floppy, but they can be rigidified by the application of external strain, which is theoretically well understood.

View Article and Find Full Text PDF

Importance: The effectiveness of different approaches to dementia care is unknown.

Objective: To determine the effectiveness of health system-based, community-based dementia care, and usual care for persons with dementia and for caregiver outcomes.

Design, Setting, And Participants: Randomized clinical trial of community-dwelling persons living with dementia and their caregivers conducted at 4 sites in the US (enrollment June 2019-January 2023; final follow-up, August 2023).

View Article and Find Full Text PDF

Cardiovascular disease (CVD) is the leading cause of death in the United States. Damage in the cardiovascular system can be due to environmental exposure, trauma, drug toxicity, or numerous other factors. As a result, cardiac tissue and vasculature undergo structural changes and display diminished function.

View Article and Find Full Text PDF

The anaerobic bacterium Clostridium cellulovorans is a promising candidate for the sustainable production of biofuels and platform chemicals due to its cellulolytic properties. However, the genomic engineering of the species is hampered because of its poor genetic accessibility and the lack of genetic tools. To overcome this limitation, a protocol for triparental conjugation was established that enables the reliable transfer of vectors for markerless chromosomal modification into C.

View Article and Find Full Text PDF

Plant-associated microbiome plays important role in maintaining overall health of the host plant. Xanthium strumarium displaying resilience to various environmental fluctuations may harbor some bacterial isolates which can help this plant to grow worldwide. The present study aims to isolate endophytic and rhizospheric bacteria from X.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!