Investigating the intrinsic top-down dynamics of deep generative models.

Sci Rep

Department of General Psychology and Padova Neuroscience Center, University of Padova, Padova, Italy.

Published: January 2025

Hierarchical generative models can produce data samples based on the statistical structure of their training distribution. This capability can be linked to current theories in computational neuroscience, which propose that spontaneous brain activity at rest is the manifestation of top-down dynamics of generative models detached from action-perception cycles. A popular class of hierarchical generative models is that of Deep Belief Networks (DBNs), which are energy-based deep learning architectures that can learn multiple levels of representations in a completely unsupervised way exploiting Hebbian-like learning mechanisms. In this work, we study the generative dynamics of a recent extension of the DBN, the iterative DBN (iDBN), which more faithfully simulates neurocognitive development by jointly tuning the connection weights across all layers of the hierarchy. We characterize the number of states visited during top-down sampling and investigate whether the heterogeneity of visited attractors could be increased by initiating the generation process from biased hidden states. To this end, we train iDBN models on well-known datasets containing handwritten digits and pictures of human faces, and show that the ability to generate diverse data prototypes can be enhanced by initializing top-down sampling from "chimera states", which represent high-level features combining multiple abstract representations of the sensory data. Although the models are not always able to transition between all potential target states within a single-generation trajectory, the iDBN shows richer top-down dynamics in comparison to a shallow generative model (a single-layer Restricted Bolzamann Machine). We further show that the generated samples can be used to support continual learning through generative replay mechanisms. Our findings suggest that the top-down dynamics of hierarchical generative models is significantly influenced by the shape of the energy function, which depends both on the depth of the processing architecture and on the statistical structure of the sensory data.

Download full-text PDF

Source
http://dx.doi.org/10.1038/s41598-024-85055-yDOI Listing

Publication Analysis

Top Keywords

generative models
20
top-down dynamics
16
hierarchical generative
12
generative
8
statistical structure
8
top-down sampling
8
sensory data
8
models
7
top-down
6
dynamics
5

Similar Publications

Comprehensive Analysis Reveals the Potential Diagnostic Value of Biomarkers Associated With Aging and Circadian Rhythm in Knee Osteoarthritis.

Orthop Surg

January 2025

Department of Orthopedics, Tianjin Medical University General Hospital, International Science and Technology Cooperation Base of Spinal Cord Injury, Tianjin Key Laboratory of Spine and Spinal Cord, Tianjin, China.

Objective: Knee osteoarthritis (KOA) is characterized by structural changes. Aging is a major risk factor for KOA. Therefore, the objective of this study was to examine the role of genes related to aging and circadian rhythms in KOA.

View Article and Find Full Text PDF

Structural insights into the role of the prosegment binding loop in a papain-superfamily cysteine protease from Treponema denticola.

Acta Crystallogr F Struct Biol Commun

February 2025

Department of Structural Biology, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, State University of New York, Buffalo, New York, USA.

Periodontal diseases afflict 20-50% of the global population and carry serious health and economic burdens. Chronic periodontitis is characterized by inflammation of the periodontal pocket caused by dysbiosis. This dysbiosis is coupled with an increase in the population of Treponema denticola, a spirochete bacterium with high mobility and invasivity mediated by a number of virulence factors.

View Article and Find Full Text PDF

Background: Verbal autopsy (VA) has been a crucial tool in ascertaining population-level cause of death (COD) estimates, specifically in countries where medical certification of COD is relatively limited. The World Health Organization has released an updated instrument (Verbal Autopsy Instrument 2022) that supports electronic data collection methods along with analytical software for assigning COD. This questionnaire encompasses the primary signs and symptoms associated with prevalent diseases across all age groups.

View Article and Find Full Text PDF

Advances and applications of genome-edited animal models for severe combined immunodeficiency.

Zool Res

January 2025

Stomatological Hospital, School of Stomatology, Southern Medical University, Guangzhou, Guangdong 510280, China. E-mail:

Severe combined immunodeficiency disease (SCID), characterized by profound immune system dysfunction, can lead to life-threatening infections and death. Animal models play a pivotal role in elucidating biological processes and advancing therapeutic strategies. Recent advances in gene-editing technologies, including zinc-finger nucleases (ZFNs), transcription activator-like effector nucleases (TALENs), CRISPR/Cas9, and base editing, have significantly enhanced the generation of SCID models.

View Article and Find Full Text PDF

Identification of novel rodent and shrew orthohepeviruses sheds light on hepatitis E virus evolution.

Zool Res

January 2025

Institute of Preventive Medicine, School of Public Health, Dali University, Yunnan Key Laboratory of Screening and Research on Anti-pathogenic Plant Resources from Western Yunnan, Yunnan Key Laboratory of Zoonotic Disease Cross-border Prevention and Quarantine, Dali, Yunnan 671000, China. E-mail:

The family has seen an explosive expansion in its host range in recent years, yet the evolutionary trajectory of this zoonotic pathogen remains largely unknown. The emergence of rat hepatitis E virus (HEV) has introduced a new public health threat due to its potential for zoonotic transmission. This study investigated 2 464 wild small mammals spanning four animal orders, eight families, 21 genera, and 37 species in Yunnan Province, China.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!