Tulip poplar () is a member of the Magnolia family, is a large, fast-growing, long-lived, deciduous tree native to eastern North America. One-year-old tulip poplar seedlings grown under field conditions in a commercial nursery in Warren County, Tennessee, exhibited severe root rot in May 2024. Dark brown to black lesions were observed on the affected roots. Disease severity was 60% of the affected root area, and disease incidence was 45% of 300 plants. Symptomatic root tissues were surface-disinfected with 70% ethanol and washed twice with distilled water. Small sections of root tissue were placed in Petri dishes containing V8-PARPH (V8 juice agar amended with pimaricin, ampicillin, rifampicin, pentachloronitrobenzene, and hymexazol) agar and incubated at 24°C in an 8-hour photoperiod cycle. After 3 days of incubation, whitish cottony mycelia with radiate and chrysanthemum flower-like growth patterns were observed (Supplementary Fig. 1a). The hyphae were coenocytic and 5.5 μm wide. Sporangia were subglobose with papillate, filamentous to globose smooth oogonia (18.35 to 23.86 μm; = 50), bell-shaped antheridia, and spherical zoospores that are characteristic of (de Cock et al. 2015) (Supplementary Fig. 1b and c). Total DNA was extracted (DNeasy PowerLyzer Microbial Kit) from 7-day-old isolates FBG7781-1 and FBG7781-2 and amplified using the ITS1/ITS4 (White et al. 1990), NL1/NL4 (Baten et al. 2014), Levup/Fm85mod (Robideau et al. 2011) and Cox2F/Cox2RC4 (Hudspeth et al. 2000) primer pairs. Isolates were sequenced using for genetic markers, including the ribosomal internal transcribed spacer (ITS), the 28S large subunit (LSU) of ribosomal RNA, the mitochondrial cytochrome c oxidase subunit I (COXI) and cytochrome c oxidase subunit II (COXII), respectively. The sequences (GenBank accession nos. PQ555199 and PQ555200 for ITS, PQ555205 and PQ555206 for LSU, PQ562067 and PQ562068 for COXI, and PQ562065 and PQ562066 for COXII) were 100% identical to the ITS, LSU, COX1, and COXII genetic markers of isolates in GenBank (ITS: PQ050141, LSU: AB468723, COXI: GU133478, COXII: AB468910). Pathogenicity tests were performed on 1-year-old tulip poplar seedlings grown in 1-gal containers (3.8 L) to fulfill Koch's postulates. Tulip poplar seedlings were drenched and inoculated (150 ml/plant) with a pathogen slurry (two plates of 7-day-old culture/liter) as described in Panth et al. 2021, using isolates FBG7781-1 and FBG7781-2 (five plants per isolate). Five plants were drenched with V8-PARPH agar slurry without the pathogen and served as controls. The study was conducted in a greenhouse maintained at 21 to 23°C and 70% relative humidity and watered twice daily for 2 min using an overhead irrigation system. Fifteen days after inoculation, dark brown lesions developed in the roots of all inoculated plants (Supplementary Fig. 2a). No symptoms were observed in the control plants (Supplementary Fig. 2b). Isolates resembling the morphological characteristics of were recovered from inoculated plants using the method described above, and their identity as was confirmed by DNA sequencing with the same four primer pairs previously described. has been reported to cause root rot in flowering cherry, ginkgo, red maple, and redbud in Tennessee (Baysal-Gurel et al. 2021, Liyanapathiranage et al. 2023, Panth et al. 2021). To our knowledge, this is the first report of causing root rot of tulip poplar in Tennessee, the United States and worldwide. This finding is significantly important for the development of a successful disease management strategy for in tulip poplar.
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http://dx.doi.org/10.1094/PDIS-11-24-2343-PDN | DOI Listing |
Plant Dis
January 2025
Tennessee State University, Otis Floyd Nursery Research Center, 472 Cadillac Lane, McMinnville, Tennessee, United States, 37110;
Tulip poplar () is a member of the Magnolia family, is a large, fast-growing, long-lived, deciduous tree native to eastern North America. One-year-old tulip poplar seedlings grown under field conditions in a commercial nursery in Warren County, Tennessee, exhibited severe root rot in May 2024. Dark brown to black lesions were observed on the affected roots.
View Article and Find Full Text PDFPlant Mol Biol
October 2023
Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0002, South Africa.
A multi-tiered transcriptional network regulates xylem differentiation and secondary cell wall (SCW) formation in plants, with evidence of both conserved and lineage-specific SCW network architecture. We aimed to elucidate the roles of selected R2R3-MYB transcription factors (TFs) linked to Eucalyptus wood formation by identifying genome-wide TF binding sites and direct target genes through an improved DAP-seq protocol combined with machine learning for target gene assignment (DAP-seq-ML). We applied this to five TFs including a well-studied SCW master regulator (EgrMYB2; homolog of AtMYB83), a repressor of lignification (EgrMYB1; homolog of AtMYB4), a TF affecting SCW thickness and vessel density (EgrMYB137; homolog of PtrMYB074) and two TFs with unclear roles in SCW regulation (EgrMYB135 and EgrMYB122).
View Article and Find Full Text PDFPremise: Sample preparation in genomics is a critical step that is often overlooked in molecular workflows and impacts the success of downstream genetic applications. This study explores the use of a recently developed focused ultrasound extraction (FUSE) technique to enable the rapid release of DNA from plant tissues for genetic analysis.
Methods: FUSE generates a dense acoustic cavitation bubble cloud that pulverizes targeted tissue into acellular debris.
Zoo Biol
March 2023
The Duke Lemur Center, Durham, North Carolina, USA.
Atmos Environ (1994)
September 2022
US Environmental Protection Agency, 109 T.W. Alexander Drive, RTP, NC 27711.
It is well known that exposure to ambient O can decrease growth in many tree species in the United States (US). Our study reports experimental data from outdoor open-top chamber (OTC) studies that quantify total biomass response changes for seedlings of 16 species native to western and eastern North America, which were exposed to several levels of elevated O for one or more years. The primary objective of this study is to establish a reference set of parameters for these seedling exposure-response relationships using a 3-month (92 day) 12-hr W126 O metric used by US Environmental Protection Agency and other agencies to assess risk to trees from O exposure.
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