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What's in a Clade? Clinical Impact of Rhinovirus Serotype on the Development and Severity of Asthma Exacerbations.
J Allergy Clin Immunol Pract
January 2025
Division of Asthma, Allergy and Immunology, Department of Medicine, Carter Immunology Center, University of Virginia Health Systems, Charlottesville, Va. Electronic address:
SQUAMOSA Promoter Binding Protein-Like (SPL) Gene Family: TRANSCRIPTOME-Wide Identification, Phylogenetic Relationship, Expression Patterns and Network Interaction Analysis in Panax ginseng C. A. Meyer.
Plants (Basel)
March 2020
College of Life Science, Jilin Agricultural University, Changchun, Jilin, 130118, China.
( promoter binding protein-like) gene family is specific transcription factor in the plant that have an important function for plant growth and development. Although the gene family has been widely studied and reported in many various plant species from gymnosperm to angiosperm, there are no systematic studies and reports about the gene family in C. A.
View Article and Find Full Text PDFThe complete mitochondrial genome of milk shark, (Ruppell 1837).
Mitochondrial DNA B Resour
December 2019
South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Guangzhou, P.R. China.
The complete mitogenome sequence of the milk shark, of which was determined using long PCR. The genome was 16,693 bp in length and it contained 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and 1 D-loop region. The overall base composition of the heavy strand is A (31.
View Article and Find Full Text PDFCowpox virus: What's in a Name?
Viruses
May 2017
Bundeswehr Institute of Microbiology, Neuherbergstr 11, 80937 Munich, Germany.
Traditionally, virus taxonomy relied on phenotypic properties; however, a sequence-based virus taxonomy has become essential since the recent requirement of a species to exhibit monophyly. The species has failed to meet this requirement, necessitating a reexamination of this species. Here, we report the genomic sequences of nine and, by combining them with the available data of 37 additional genomes, confirm polyphyly of and find statistical support based on genetic data for more than a dozen species.
View Article and Find Full Text PDFWhat's in an Outgroup? The Impact of Outgroup Choice on the Phylogenetic Position of Thalattosuchia (Crocodylomorpha) and the Origin of Crocodyliformes.
Syst Biol
July 2015
Department of Geoscience, University of Iowa, Iowa City, IA, USA and Current Address - Department of Geology and Geography, Georgia Southern University, Statesboro, GA, USA Department of Geoscience, University of Iowa, Iowa City, IA, USA and Current Address - Department of Geology and Geography, Georgia Southern University, Statesboro, GA, USA
Outgroup sampling is a central issue in phylogenetic analysis. However, good justification is rarely given for outgroup selection in published analyses. Recent advances in our understanding of archosaur phylogeny suggest that many previous studies of crocodylomorph and crocodyliform relationships have rooted trees on outgroup taxa that are only very distantly related to the ingroup (e.
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