Rigid, non-polarizable water models are very efficient from a computational point of view, and some of them have a great ability in predicting experimental properties. There is, however, little room for improvement in simulating water with this strategy, whose main shortcoming is that water molecules do not change their interaction parameters in response to the local molecular landscape. In this work, we propose a novel modeling strategy that involves using two rigid non-polarizable models as states that water molecules can adopt depending on their molecular environment. During the simulation, molecules dynamically transition from one state to another depending on a local order parameter that quantifies some local structural feature. In particular, molecules belonging to low- and high-tetrahedral order environments are represented with the TIP4P/2005 and TIP4P/Ice rigid models, respectively. In this way, the interaction between water molecules is strengthened when they acquire a tetrahedral coordination, which can be viewed as an effective way of introducing polarization effects. We call the resulting model TIP4P2005Ice and show that it outperforms either of the rigid models that build it. This multi-state strategy only slows down simulations by a factor of 1.5 compared to using a standard non-polarizable model and holds great promise for improving simulations of water and aqueous solutions.
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http://dx.doi.org/10.1063/5.0247832 | DOI Listing |
Alzheimers Dement
December 2024
Yonsei University, Incheon, Incheon, Korea, Republic of (South).
Background: The accumulation of amyloidogenic proteins is recognized as a primary biomarker, initiator of pathology, and a potential therapeutic target for Alzheimer's disease (AD). An unbiased screening of a small molecule library was conducted to identify new chemical compounds exhibiting amyloid-dissociative properties.
Method: The ability of aryloxypropanolamine derivatives to dissociate amyloid-β (Aβ) aggregates was evaluated through in vitro assays.
Alzheimers Dement
December 2024
Helen Wills Neuroscience Institute, University of California, Berkeley, CA, USA.
"Dual Perspectives" integrates multiple MRI scans, creating a nuanced synthesis of grey matter and diffusion-based regional connections. This rendering holds particular significance in the realm of Alzheimer's and dementia research by offering a comprehensive examination of data crucial for understanding these complex neurodegenerative conditions. The inclusion of grey matter provides a detailed insight into the structural composition of the brain.
View Article and Find Full Text PDFTurk J Chem
October 2024
Supramolecular Compounds Division, Institute of General and Inorganic Chemistry, Uzbekistan Academy of Sciences, Tashkent, Uzbekistan.
The cocrystal (or supramolecular complex) between the Cu(II) complex of salicylic acid and uncoordinated piracetam has been synthesized. Its structure is characterized by elemental analysis, FT-IR, UV-Vis spectroscopy, and X-ray crystallography. Spectroscopic methods confirm the formation of the metal complex, while X-ray crystallography establishes the molecular and crystal structure of the obtained compound.
View Article and Find Full Text PDFMater Horiz
January 2025
Department of Chemical and Biomolecular Engineering, Seoul National University of Science and Technology (SeoulTech), Seoul 01811, Republic of Korea.
Aqueous two-phase systems (ATPSs) have primarily been developed in the form of emulsions to enhance their utilization in green and biocompatible applications. However, numerous challenges have arisen in forming stable and processable water-in-water (W/W) emulsion systems, as well as in fine-tuning the interconnectivity of their internal structure, which can significantly impact their performance. To effectively address these challenges, we elucidate, for the first time, the root cause of the poor stability of W/W emulsions.
View Article and Find Full Text PDFJ Phys Chem Lett
January 2025
Université Claude Bernard Lyon 1, INSA Lyon, Université Jean Monnet, CNRS, UMR 5223, Ingénierie des Matériaux Polymères, F-69621 Villeurbanne Cédex, France.
Supercooling allows for retarding water crystallization toward negative Celsius temperatures. Previous findings of CO molecules shifting into bicarbonate species upon freezing, the latter which naturally adsorb on hydrophobic interfaces, are put in perspective here to interpret earlier published data. Since it has been shown that ice nucleation is unlikely on negatively charged surfaces, I propose that bicarbonates adsorb on most solid particles present in water that act as nucleators, thus retarding freezing and enhancing supercooling.
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