Properties of Maxentropic DNA Synthesis Codes.

Entropy (Basel)

Science, Mathematics and Technology Cluster, Singapore University of Technology and Design (SUTD), 8 Somapah Rd, Singapore 487372, Singapore.

Published: November 2024

Low-weight codes have been proposed for efficiently synthesizing deoxyribonucleic acid (DNA) for massive data storage, where a multiple of DNA strands are synthesized in parallel. We report on the redundancy and information rate of maxentropic low-weight codes for asymptotically large codeword length. We compare the performance of low-complexity nibble replacement (NR) codes, which are designed to minimize the synthesis time, with the performance of maxentropic low-weight codes. Finally, the asymptotic redundancy and information rate of codes with a runlength limitation are investigated.

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http://dx.doi.org/10.3390/e26121028DOI Listing

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Properties of Maxentropic DNA Synthesis Codes.

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November 2024

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