We report here a new ligand for the peroxisome-proliferator-activated receptor type α (PPARα), an N-tosyl hydrazone benzopyran that was designed throughout the mapping of the polar zone of the binding site of PPARα; such a compound displays a strong activity on this receptor that is comparable to that of the reference compound WY-14643. For the design of the -tosyl hydrazone benzopyran, we have carried out an exhaustive conformational study of WY-14643 and a previously reported hydrazine benzopyran derivative using conformational potential energy surfaces (PES). This study allowed us to map in a systematic way the entire binding site of the PPARα. PESs allowed us to evaluate all of the critical points on the surface (minimum, transition states, and maxima) and determine the different conformational interconversion paths. Once the geometries of the different complexes were determined, we carried out the study of the different molecular interactions that stabilize these complexes through the use of QTAIM calculations. We report here for the first time the molecular behavior of WY-14643 and two compounds synthesized in our lab interacting in the active site of the PPARα providing all of the details about the different interactions that stabilize the formation of these complexes. On the basis of such information, we were able to design and synthesize a new N-tosyl hydrazone benzopyran possessing a strong agonist effect on PPARα. The information provided by this study is very useful to get a better understanding of the behavior with this type of ligand on the PPARα, giving also interesting information as a guide for the design of new ligands for this receptor.
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http://dx.doi.org/10.1021/acs.jcim.4c01887 | DOI Listing |
J Chem Inf Model
January 2025
Facultad de Química, Bioquímica y Farmacia, Universidad Nacional de San Luis, Instituto Multidisciplinario de Investigaciones Biológicas (IMIBIO-SL). CONICET, Ejército de los Andes 950, 5700 San Luis, Argentina.
We report here a new ligand for the peroxisome-proliferator-activated receptor type α (PPARα), an N-tosyl hydrazone benzopyran that was designed throughout the mapping of the polar zone of the binding site of PPARα; such a compound displays a strong activity on this receptor that is comparable to that of the reference compound WY-14643. For the design of the -tosyl hydrazone benzopyran, we have carried out an exhaustive conformational study of WY-14643 and a previously reported hydrazine benzopyran derivative using conformational potential energy surfaces (PES). This study allowed us to map in a systematic way the entire binding site of the PPARα.
View Article and Find Full Text PDFJ Mater Chem B
October 2024
College of Pharmaceutical Sciences, Zhejiang University, Hangzhou 310058, China.
Understanding the spatiotemporal dynamics of formaldehyde (FA) is crucial for elucidating its pathophysiology. In this study, we designed a series of organelle-resolved probes to investigate FA dynamics. By incorporating various organelle anchors into a coumarin hydrazonate, we developed a series of probes with excellent organelle selectivity and FA specificity, enabling rapid and precise sensing of FA in an organelle-resolved way.
View Article and Find Full Text PDFTalanta
November 2024
School of Chemistry and Chemical Engineering, University of Jinan, Jinan, Shandong, 250022, PR China. Electronic address:
Luminescence
July 2024
Department of Chemistry, The National Institute of Engineering, North campus, Mysore, Karnataka, India.
Herein, we have reported a red-emitting 4-methyl coumarin fused barbituric acid azo dye (4-MCBA) synthesized by conventional method. Density functional theory (DFT) studies of tautomer compounds were done using (B3LYP) with a basis set of 6-31G(d,p). NLO analysis has shown that tautomer has mean first-order hyperpolarisabilities (β) value of 1.
View Article and Find Full Text PDFJ Inorg Biochem
September 2024
NMR Centre, Ruđer Bošković Institute, Zagreb, Croatia. Electronic address:
Wet synthesis approach afforded four new heteroleptic mononuclear neutral diamagnetic oxidovanadium(V) complexes, comprising salicylaldehyde-based 2-furoic acid hydrazones and a flavonol coligand of the general composition [VO(fla)(L-ONO)]. The complexes were comprehensively characterized, including chemical analysis, conductometry, infrared, electronic, and mass spectroscopy, as well as 1D H and proton-decoupled C(H) NMR spectroscopy, alongside extensive 2D HH COSY, HC HMQC, and HC HMBC NMR analyses. Additionally, the quantum chemical properties of the complexes were studied using Gaussian at the B3LYP, HF, and M062X levels on the 6-31++g(d,p) basis sets.
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