A novel hyperactive variant of the transposase facilitates non-viral genome engineering.

Mol Ther Nucleic Acids

Research Center, Division of Hematology, Cell and Gene Therapy, Paul-Ehrlich-Institut, 63225 Langen, Germany.

Published: December 2024

AI Article Synopsis

  • The SB transposon system is valuable for genetic applications like gene therapy, and a new hyperactive variant of the SB100X transposase, known as SB200X, was discovered with a specific amino acid change that increases its activity by about 2-fold.
  • This hyperactivity is linked to an amino acid at position 124, located in the transposase's structural region, suggesting it can partially resist a regulatory mechanism called overproduction inhibition.
  • Additionally, the Q124C variant not only boosts the efficiency of another variant (K248R) but also helps maintain a safer profile for genome-wide integration, making SB200X a promising tool for genome engineering in research and clinical settings.

Article Abstract

The (SB) transposon system is a useful tool for genetic applications, including gene therapy. We discovered a hyperactive variant of the SB100X transposase, called SB200X. This mutant, resulting from a specific amino acid replacement (Q124C), showed an ∼2-fold increase in transposition activity in various human and murine cells. Other amino acid replacements in position 124 also led to a hyperactive phenotype. Position 124 is located at the very edge of the linker region that connects the DNA-binding and catalytic domains of the transposase. Consistent with a role of the linker in an autoregulatory mechanism called overproduction inhibition (OPI) in the monophyletic group of transposases, we show that the hyperactivity of Q124C manifests at high concentrations of the transposase, suggesting a partial resistance of SB200X to OPI. We demonstrate that the hyperactive phenotype of Q124C can be combined with features of other useful mutations in the SB transposase. Namely, Q124C improves the transposition efficiency of the previously described K248R variant, while maintaining or even slightly improving its safer genome-wide integration profile. The SB200X transposase could enhance the utility of SB transposon-mediated genome engineering in preclinical and clinical applications.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11626015PMC
http://dx.doi.org/10.1016/j.omtn.2024.102381DOI Listing

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