Investigation and validation of neurotransmitter receptor-related biomarkers for forecasting clinical outcomes and immunotherapeutic efficacy in breast cancer.

Gene

Department of Mammary Gland, Women and Children's Hospital of Chongqing Medical University, Chongqing, China; Department of Mammary Gland, Chongqing Health Center for Women and Children, Chongqing, China. Electronic address:

Published: February 2025

AI Article Synopsis

  • - This study aims to explore the role of neurotransmitter receptor-related genes (NRRGs) in predicting breast cancer (BC) patient survival by creating a prognostic model based on these genes.
  • - Researchers identified 45 key genes by intersecting differentially expressed genes related to BC with NRRGs, and constructed survival models using various statistical analyses.
  • - The study found that certain biomarkers, including DLG3, SLC1A1, PSCA, and PRKCZ, can effectively predict the prognosis of BC patients, with validation of the model demonstrating its reliability and significance in survival outcomes.

Article Abstract

Purpose: The prognostic role of neurotransmitters and their receptors in breast cancer (BC) has not been fully investigated. The aim of this study was to construct a survival model for the prognosis of BC patients based on neurotransmitter receptor-related genes (NRRGs).

Methods: BC-related differentially expressed genes (DEGs) were screened and intersected with NRRGs. GO, KEGG and PPI analyses were performed. Univariate Cox, Least Absolute Shrinkage and Selection Operator (LASSO) and multivariate Cox regression analyses were used to construct prognostic models for biomarker expression levels. The model was validated using an external validation set. The receiver operating characteristic curves (ROC) for diagnostic value prediction and clinicopathologic characteristic nomogram were constructed. qRT-PCR was used for further in vitro validation experiments.

Results: Forty-five overlapping genes were obtained by intersecting BC-related DEGs with 172 NRRGs. Univariate Cox, LASSO and multivariate Cox regression analyses were used to construct prognostic models for the expression levels of biomarkers including DLG3, SLC1A1, PSCA and PRKCZ. The feasibility of the model was validated by the GEO validation set. ROC curves were established for diagnostic value prediction. Patients in the high-risk group had a worse prognosis, higher TMB score, higher probability of gene mutation, and higher immune cell infiltration. RiskScore, M, N and Age were strongly correlated with survival. The mRNA expression levels of DLG3, PSCA and PRKCZ in the BC group were significantly higher than those in the control group.

Conclusion: Risk prediction model based on DLG3, SLC1A1, PSCA and PRKCZ, which are closely related to BC prognosis, was successfully constructed.

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Source
http://dx.doi.org/10.1016/j.gene.2024.149135DOI Listing

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