Two Gram-stain-negative, aerobic, motile and short-rod-shaped bacterial strains, designated CSK15Z-1 and MSK8Z-1, were isolated from branch of Kandelia candel and Rhizophora stylosa, respectively, collected from Shankou Mangrove Nature Reserve in Guangxi, China, and had the ability to produce carotenoid. The 16S rRNA gene sequence similarity, average nucleotide identity (ANI) values, amino acid identity (AAI) values, and the digital DNA-DNA hybridization (dDDH) values between the two strains indicated that they should be affiliated with the same species. The AAI values between the two strains and other related species in the family Aurantimonadaceae ranged between 61.0 and 66.6%. Phylogenetic analyses based on 16S rRNA gene sequences indicated that the two strains belong to the family Aurantimonadaceae and were most closely related to Aurantimonas endophytica EGI 6500337 and Aureimonas glaciistagni PAMC 27157. Phylogenomic analysis based on genome sequences showed that the two strains formed a single and stable branch within the family Aurantimonadaceae. The major respiratory quinone was Q-10. The predominant fatty acids were Cω7c, C cycle ω8c and C. The polar lipids contained diphosphatidylglycerol, phosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylmonomethylethanolamine, an unidentified aminolipid and an unidentified lipid. In accordance with the AAI values, phylogenomic and phylogenetic analysis, phenotypic and chemotaxonomic characteristics, and genomic characterization, strains CSK15Z-1 and MSK8Z-1 should be considered as a novel genus and species in the family Aurantimonadaceae, for which the name Mangrovibrevibacter kandeliae gen. nov. sp. nov. is proposed. The type strain is CSK15Z-1 (= MCCC 1K07183 = JCM 34923).
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http://dx.doi.org/10.1007/s10482-024-02049-6 | DOI Listing |
Antonie Van Leeuwenhoek
November 2024
School of Basic Medical Sciences, Zunyi Medical University, Zunyi, 563006, People's Republic of China.
Front Microbiol
December 2023
Biological Resource Center, Korean Collection for Type Cultures (KCTC), Korea Research Institute of Bioscience and Biotechnology (KRIBB), Jeongeup, Republic of Korea.
A novel endophytic bacterium, designated DY-R2A-6, was isolated from oat ( L.) seeds and found to produces β-carotene. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain DY-R2A-6 had 96.
View Article and Find Full Text PDFInt J Syst Evol Microbiol
April 2023
Key Laboratory of Molecular Medicine and Biotherapy, School of Life Science, Beijing Institute of Technology, Beijing 100081, PR China.
Strain R10 was isolated from a gravel soil sample obtained from Deception Island, Antarctica. The isolate was a Gram-stain-negative, strictly aerobic, motile, short-rod-shaped bacterium, and its colonies were orange yellow in colour. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain R10 belonged to the family and shared highest sequence similarity with LZB041 (96.
View Article and Find Full Text PDFInt J Syst Evol Microbiol
April 2023
State Key Laboratory of Microbiol Technology, Institute of Microbial Technology, Shandong University, Qingdao, 266237, PR China.
Int J Syst Evol Microbiol
September 2018
1Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100050, PR China.
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