Whole-genome re-sequencing of the Baikal seal and other phocid seals for a glimpse into their genetic diversity, demographic history, and phylogeny.

GigaByte

Institute for Ecology, Evolution and Diversity, Goethe University, Max-von-Laue-Strasse. 9, Frankfurt am Main, 60438, Germany.

Published: November 2024

AI Article Synopsis

  • The Baikal seal, a freshwater seal unique to Lake Baikal, has a long history of being landlocked and is classified as a species of least concern due to its stable population despite its limited habitat.
  • Recent research has expanded on genetic studies by sequencing the genomes of six Baikal seals alongside other seal species, enhancing our understanding of their evolutionary relationships.
  • Findings indicate that the genetic diversity of the Baikal seal is comparable to that of other seals, prompting calls for further research on genomic diversity across its range.

Article Abstract

The Baikal seal () is a freshwater seal endemic to Lake Baikal, where it became landlocked million years ago. It is an abundant species of least concern despite the limited habitat. Research on its genetic diversity had only been done on mitochondrial genes, restriction fragment analyses, and microsatellites, before its reference genome was published. Here, we report the genome sequences of six Baikal seals, and one individual of the Caspian, ringed, and harbor seal, re-sequenced from Illumina paired-end short read data. Heterozygosity calculations of the six newly sequenced individuals are similar to previously reported genomes. Also, the novel genome data of the other species contributed to a more complete phocid seal phylogeny based on whole-genome data. Despite the isolation of the land-locked Baikal seal, its genetic diversity is comparable to that of other seal species. Future targeted genome studies need to explore the genomic diversity throughout their distribution.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11602651PMC
http://dx.doi.org/10.46471/gigabyte.142DOI Listing

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  • Recent research has expanded on genetic studies by sequencing the genomes of six Baikal seals alongside other seal species, enhancing our understanding of their evolutionary relationships.
  • Findings indicate that the genetic diversity of the Baikal seal is comparable to that of other seals, prompting calls for further research on genomic diversity across its range.
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