Comparison of the Complete Chloroplast Genomes of : Two Korean Endemic Plant Species.

Genes (Basel)

Division of Forest Biodiversity, Korea National Arboretum, 509 Gwangneungsumogwon-ro, Soheul-eup, Pocheon-si 11186, Gyeonggi-do, Republic of Korea.

Published: October 2024

AI Article Synopsis

  • The study focuses on two endemic species of a plant genus found in Korea, among a broader group of 18 species distributed across East Asia and Northeastern America.
  • Researchers sequenced and analyzed the complete chloroplast genomes of these plants, discovering their structures and genetic components.
  • Findings highlight the genetic similarities and differences in comparison with five other related species, which aids in understanding the evolutionary relationships within the genus.

Article Abstract

Background: , consisting of about 18 species, is distributed throughout East Asia and Northeastern America, and most species are widely cultivated as ornamental plants. A total of four species of have been confirmed to be distributed throughout Korea, two of which are endemic to Korea.

Methods: In this study, we sequenced and assembled the complete chloroplast genomes of two endemic Korean plants using Illumina sequencing technology, identified simple sequence repeats (SSRs) and repetitive sequences, and compared them with three previously reported chloroplast genomes.

Results: The chloroplast genomes of the two species were 156,968 and 57,142 bp in length and had a four-part circular structure. They consisted of a large single-copy region of 87,223 and 87,272 bp and a small single-copy region of 18,167 and 18,138 bp, separated by a pair of inverted repeats (IRa and IRb, 25,789 and 25,866 bp). The genomes contained 130 genes, 49 SSRs, and 49 long repetitive sequences. Comparative analysis with the chloroplast genomes of five species indicated that was closely related to and to .

Conclusions: This study provides valuable references for the identification of two endemic Korean species and contributes to a deeper understanding of the phylogeny and evolution of the genus .

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11593540PMC
http://dx.doi.org/10.3390/genes15111410DOI Listing

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