Complete Mitogenome Assembly and Comparative Analysis of (Ericaceae), a Rich Source of Health-Promoting Molecules.

Int J Mol Sci

Jiangsu Academy of Forestry, 109 Danyang Road, Dongshanqiao, Nanjing 211153, China.

Published: November 2024

AI Article Synopsis

Article Abstract

is a valuable plant used both as food and medicine in China, but low production limits the development of its industry. As such, it is important to develop genetic resources for the high-value species for preservation of wild populations and utilization. The complete chloroplast and nuclear genomes have already been available; however, its mitogenome has not yet been characterized. Here, the mitogenome was assembled using HiFi reads, and a comparative analysis was conducted. The mitogenome was a circular sequence of 708,384 bp with a GC content of 45.28%, in which 67 genes were annotated, including 36 protein-coding genes, 26 tRNA genes, 3 rRNA genes, and 2 pseudogenes. Overall, 370 dispersed repeats, 161 simple repeats, and 42 tandem repeats were identified, and 360 RNA editing sites were predicted. There was extensive DNA migration among the three genomes. In addition, most of the protein-coding genes underwent purifying selection throughout evolution, and the nucleotide diversity was highly variable. In addition, comparative analysis indicated that the sizes, structures, and gene contents of the mitogenomes differed significantly, but the GC contents and functional genes were relatively conserved among the Ericales species. Mitogenome-based phylogenetic analysis indicated the precise. evolutionary and taxonomic status of . The complete mitogenome represents the last link of the reference genome of and lays the foundation for effective utilization and molecular breeding of this plant.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11593731PMC
http://dx.doi.org/10.3390/ijms252212027DOI Listing

Publication Analysis

Top Keywords

comparative analysis
12
complete mitogenome
8
protein-coding genes
8
analysis indicated
8
genes
6
mitogenome assembly
4
assembly comparative
4
analysis
4
analysis ericaceae
4
ericaceae rich
4

Similar Publications

Purpose: To implement a low-rank and subspace model-based reconstruction for 3D deuterium metabolic imaging (DMI) and compare its performance against Fourier transform-based (FFT) reconstruction in terms of spectral fitting reliability.

Methods: Both reconstruction methods were applied on simulated and experimental DMI data. Numerical simulations were performed to evaluate the effect of increasing acceleration factors.

View Article and Find Full Text PDF

Previous studies have proved trace mineral disorders to be related to changes in oxidative stress, inflammatory state, and immune response in asthmatics. However, there is a scarcity of studies that examine the correlation between copper intake with mortality in asthmatic people. The aim of this research was to investigate the effect of copper intake on the asthmatic population's mortality.

View Article and Find Full Text PDF

Objective: Splenectomy is regularly performed in total and distal pancreatectomy due to technical reasons, lymph node dissection and radicality of the operation. However, the spleen serves as an important organ for competent immune function, and its removal is associated with an increased incidence of cancer and a worse outcome in some cancer entities (Haematologica 99:392-398, 2014; Dis Colon Rectum 51:213-217, 2008; Dis Esophagus 21:334-339, 2008). The impact of splenectomy in pancreatic cancer is not fully resolved (J Am Coll Surg 188:516-521, 1999; J Surg Oncol 119:784-793, 2019).

View Article and Find Full Text PDF

Background: The high burden of malaria in Africa is largely due to the presence of competent and adapted Anopheles vector species. With invasive Anopheles stephensi implicated in malaria outbreaks in Africa, understanding the genomic basis of vector-parasite compatibility is essential for assessing the risk of future outbreaks due to this mosquito. Vector compatibility with P.

View Article and Find Full Text PDF

Objective: To determine which parameters, including femur morphology, proximal femur bone mineral density, or patient characteristics, are associated with bisphosphonate-related atypical femur fractures (AFFs) and to investigate the relationships between AFF location and these parameters.

Materials And Methods: Sixteen females with a history of bisphosphonate use who presented with AFFs and 38 females without AFFs, even those with long-term bisphosphonate use of > 5 years, were compared. Patient characteristics; physique, gait ability, and history of pain and medication, were recorded.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!