This study investigates the impact of crude oil contamination on the fungal community dynamics in the Evrona Nature Reserve, situated in Israel's hyper-arid Arava Valley. The reserve experienced petroleum-hydrocarbon-spill pollution at two neighboring sites in 1975 and 2014. The initial contamination was left untreated, providing a unique opportunity to compare its effects to those of the second contamination event. In 2022, soil samples were collected from both contaminated areas and nearby clean (control) sites, 47 and 7 years after the spills. The taxonomic diversity of fungal community and functional guilds, as well as various properties of the soil, were analyzed. We focused on three functional groups within fungal communities: saprotrophs, symbiotrophs, and pathotrophs. The results revealed a significant decrease in number of fungal species in the contaminated samples over time. Consequently, prolonged effect of crude oil-contaminated soils can facilitate the development of a distinct fungal community, which has adapted to the conditions of oil contamination. This study aims to elucidate the dynamics of fungal communities in oil-contaminated soils, contributing to a better understanding of their behavior and adaptation in such environments.
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http://dx.doi.org/10.1007/s10661-024-13387-3 | DOI Listing |
PeerJ
January 2025
Laboratorio de Interacciones Bióticas, Centro de Investigación en Ciencias Biológicas, Universidad Autónoma de Tlaxcala, San Felipe Ixtacuixtla, Tlaxcala, Mexico.
Background: Understanding the diversity and distribution of fungal communities at a regional scale is important since fungi play a crucial role in ecosystem functioning. Our study used environmental metagenomics to determine fungal communities in mountainous forest soils in the central highlands of Mexico.
Methods: We used four different bioinformatic workflows to profile fungal assemblages, .
Curr Microbiol
January 2025
Key Laboratory of Basic and Application Research of Beiyao, Ministry of Education, Heilongjiang University of Chinese Medicine, Harbin, 150040, China.
Comprehending the interplay between the microbial communities of bulk soil (BS) and rhizosphere soil (RS) holds crucial significance in maintaining soil health and fertility, as well as enhancing crop quality. Our research focused on examining these microbial communities in BS and RS of Acanthopanax senticosus, along with their correlation with soil nutrients, across three distinct habitats in Yichun, Heilongjiang Province. To achieve this, we employed high-throughput sequencing technology, specifically targeting the 16S and amplicon regions.
View Article and Find Full Text PDFPLoS One
January 2025
Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, China.
Desertification is a major ecological issue worldwide that results in the destruction of terrestrial ecosystems. Restoration of desertified ecosystems has been carried out in recent decades, but the role of soil microorganisms in this process is poorly understood. Thus, to deconstruct the effects of desertified system restoration on soil microbial communities, we examined the changes in soil characteristics as well as the variations in and drivers of soil microbial diversity and community composition of the Hulun Buir Sandy Land in Northeast China, where restoration activities have been performed for approximately 30 years.
View Article and Find Full Text PDFHeliyon
January 2025
Agroécologie, French National Institute for Agriculture, Food, and Environment (INRAE), Institut Agro, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, Dijon, France.
Anaerobic digestion represents an opportunity for converting organic waste (OW) into valuable products: renewable energy (biogas) and a fertilizer (digestate). However, the long-term effects of digestates on soil biota, especially microorganisms, need to be better documented to understand the impact of digestate on soil ecosystem functioning and resilience. This study assessed the cumulative effect of repeated pig slurry digestate applications on soil microbial communities over a decade, using an in-situ approach to compare digested feedstock with undigested feedstock and other fertilization treatments.
View Article and Find Full Text PDFFood Chem X
January 2025
State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.
Flavor components largely depend on microbial activity and environmental conditions during traditional fermented food production. However, the microbial and abiotic contributions to the flavor of Chinese strong-aroma (SAB) remain poorly understood. In this study, the composition and functional profiles of the fungal and bacterial communities changed significantly after fourteen days of grain fermentation.
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