In the ideal (homophilic) regime of vanilla GNNs, nodes belonging to the same community have the same label: most of the nodes are harmonic (their unknown labels result from averaging those of their neighbors given some labeled nodes). In other words, heterophily (when neighboring nodes have different labels) can be seen as a "loss of harmonicity". In this paper, we define "structural heterophily" in terms of the ratio between the harmonicity of the network (Laplacian Dirichlet energy) and the harmonicity of its homophilic version (the so-called "ground" energy). This new measure inspires a novel GNN model (Diffusion-Jump GNN) that bypasses structural heterophily by "jumping" through the network in order to relate distant homologs. However, instead of using hops as standard High-Order (HO) GNNs (MixHop) do, our jumps are rooted in a structural well-known metric: the diffusion distance. Computing the "diffusion matrix" (DM) is the core of this method. Our main contribution is that we learn both the diffusion distances and the "structural filters" derived from them. Since diffusion distances have a spectral interpretation, we learn orthogonal approximations of the Laplacian eigenvectors while the prediction loss is minimized. This leads to an interplay between a Dirichlet loss, which captures low-frequency content, and a prediction loss which refines that content leading to empirical eigenfunctions. Finally, our experimental results show that we are very competitive with the State-Of-the-Art (SOTA) both in homophilic and heterophilic datasets, even in large graphs.
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http://dx.doi.org/10.1016/j.neunet.2024.106830 | DOI Listing |
Geriatr Nurs
January 2025
School of Nursing and Division of Rehabilitation and Regenerative Medicine, Columbia University, New York, NY, USA. Electronic address:
Objective: To evaluate associations between brain structure/function with physical function and functional capacity in older adults with CKD and cognitive complaints.
Methods: We evaluated associations between neuroimaging and cognitive function with functional capacity and physical function in older adults (60-80years) with CKD and cognitive complaints (n = 39; age 67.6 years).
Comput Biol Med
January 2025
Department of Electrical and Computer Engineering, University of Florida, Gainesville, FL, 32610, United States; Department of Medicine, University of Florida, Gainesville, FL, 32610, United States; Department of Health Outcomes and Biomedical Informatics, University of Florida, Gainesville, FL, 32610, United States; Intelligent Clinical Care Center, University of Florida, Gainesville, FL, 32610, United States. Electronic address:
Retinal image registration is essential for monitoring eye diseases and planning treatments, yet it remains challenging due to large deformations, minimal overlap, and varying image quality. To address these challenges, we propose RetinaRegNet, a multi-stage image registration model with zero-shot generalizability across multiple retinal imaging modalities. RetinaRegNet begins by extracting image features using a pretrained latent diffusion model.
View Article and Find Full Text PDFJ Mater Chem B
January 2025
State Key Laboratory of Food Nutrition and Safety, Key Laboratory of Food Quality and Healthy of Tianjin, College of Food Science and Engineering, Tianjin University of Science and Technology, Tianjin, 300457, P. R. China.
In an antioxidant peptide study, the number and position of active amino acid sites, as well as the peptides' conformation, are found to be crucial for scavenging hydroxyl radicals (˙OH). Herein, ˙the OH scavenging activity of tilapia pentapeptide (P1, YGDQY) and its analogs including P2 (YYYGDQY), P3 (YYGDQYY) and P4 (YYGPDQYY) was investigated. The results showed that the tyrosine's amount, location and the peptides' conformation played important roles in determining peptides' scavenging activity (34.
View Article and Find Full Text PDFComput Methods Programs Biomed
January 2025
Key Laboratory of Computer Network and Information Integration (Southeast University), Ministry of Education, Nanjing, China; School of Computer Science and Engineering, Southeast University, Nanjing, China.
Purpose: Dual-energy computed tomography (DECT) enables the differentiation of different materials. Additionally, DECT images consist of multiple scans of the same sample, revealing information similarity within the energy domain. To leverage this information similarity and address safety concerns related to excessive radiation exposure in DECT imaging, sparse view DECT imaging is proposed as a solution.
View Article and Find Full Text PDFJ Phys Chem B
January 2025
Department of Engineering Mechanics, KTH Royal Institute of Technology, 100 44 Stockholm, Sweden.
We here explore confinement-induced assembly of whey protein nanofibrils (PNFs) into microscale fibers using microfocused synchrotron X-ray scattering. Solvent evaporation aligns the PNFs into anisotropic fibers, and the process is followed in situ by scattering experiments within a droplet of PNF dispersion. We find an optimal temperature at which the order parameter of the protein fiber is maximized, suggesting that the degree of order results from a balance between the time scales of the forced alignment and the rotational diffusion of the fibrils.
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