Transcriptome and WGCNA Analyses Reveal Key Genes Regulating Anthocyanin Biosynthesis in Purple Sprout of Pak Choi ( L. ssp. ).

Chinese cabbage is rich in vitamins, fibre, and nutrients and is one of the primary vegetables consumed in autumn and winter in South Asia. 'Purple pak choi' sprouts are particularly rich in anthocyanins and are favoured by consumers. However, reports on the regulation of anthocyanin synthesis in purple pak choi sprouts do not exist. In this study, we examined the phenotypic development of purple pak choi sprouts after germination. The total anthocyanin content increased from 0.02 to 0.52 mg/g FW from days 0 to 6. RNA-seq data analysis revealed an increase in differentially expressed genes corresponding to the development of purple pak choi sprouts. Expression pattern analysis of genes associated with the anthocyanin biosynthesis pathway revealed a significant upregulation of structural genes during the purple phase, suggesting that the transcription factors and may play crucial regulatory roles. , , and exhibited strong interactions with key genes in the anthocyanin biosynthesis pathway, specifically . Furthermore, the expression of aligned with the expression patterns of most anthocyanin biosynthesis-related genes, whereas those of and corresponded with the expression pattern of . These results provide valuable insights into regulatory mechanisms underlying anthocyanin synthesis in purple pak choi sprouts.