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SPINK5 is a key regulator of eosinophil extracellular traps in head and neck squamous cell carcinoma. | LitMetric

SPINK5 is a key regulator of eosinophil extracellular traps in head and neck squamous cell carcinoma.

Discov Oncol

Department of Stomatology, Taizhou Central Hospital (Taizhou University Hospital), No.999, Donghai Avenue, Taizhou, 318000, Zhejiang, People's Republic of China.

Published: November 2024

AI Article Synopsis

  • * This research analyzed a gene set linked to eosinophil behavior and its role in HNSCC using bioinformatics, revealing two distinct patient clusters based on immune cell infiltration and prognosis, with one showing a worse outcome.
  • * The study identifies the serine peptidase inhibitor kazal type 5 (SPINK5) as a key gene related to eosinophil extracellular traps (EETs), suggesting that EETs could play a significant role in cancer progression and may serve as a

Article Abstract

Enhanced infiltration of eosinophils is observed surrounding solid tumors. Some studies indicate that Eosinophil extracellular traps (EETs) play a crucial role in tumor progression and metastasis. However, its specific role in head and neck squamous cell carcinoma (HNSCC) remains unclear. This study established a gene set associated with eosinophil differentiation, chemotaxis, and EETs release from previous research. Employing bioinformatics techniques, the expression and biological significance of these genes in HNSCC were analyzed. Briefly, unsupervised clustering based on expression patterns of 133 EETs-related genes to classify TCGA-HNSCC patients. Immune cell infiltration patterns were assessed using "ImmuCellAI" package. A prognostic model was constructed using ten algorithms, with EETs-related gene sets as input features. Here, unsupervised clustering of samples into two types revealed worse prognosis for Cluster 1 (C1) patients after the first year. Cluster 2 (C2) exhibited higher ImmuneScore, but with a distinct immune cell infiltration pattern from the C1. Additionally, high eosinophil abundance only in the C2 had a positive prognostic impact. Serine peptidase inhibitor kazal type 5 (SPINK5) emerged as a potential key gene mediating the formation of EETs in HNSCC. EETs not only exhibit a positive correlation with diverse anti-cancer pathways but also demonstrate positive associations with processes such as proliferation, migration, and other critical pathways. The random survival forest (RSF) model was identified as the optimal eosinophil-related prognostic model. Collectively, this study elucidates the potential impact and mediating pathways of EETs on tumors, providing a reference for targeted therapy based on EETs-related genes.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11543977PMC
http://dx.doi.org/10.1007/s12672-024-01513-zDOI Listing

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