Total RNA Extraction from Starchy Rice Endosperm.

Methods Mol Biol

Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, Tsukuba, Ibaraki, Japan.

Published: November 2024

RNA extraction is a critical step in gene expression analysis. While numerous RNA extraction kits are commercially available, most kits cannot be utilized for RNA extraction from rice endosperm that contains abundant starch. Here, I describe a three-step RNA extraction from rice starchy endosperm. The process involves phenol/chloroform extraction, ethanol precipitation, and lithium chloride precipitation. This method yields an abundant and high-quality total RNA even from a single starchy endosperm.

Download full-text PDF

Source
http://dx.doi.org/10.1007/978-1-0716-4204-7_3DOI Listing

Publication Analysis

Top Keywords

rna extraction
20
total rna
8
rice endosperm
8
extraction rice
8
starchy endosperm
8
extraction
6
rna
5
extraction starchy
4
starchy rice
4
endosperm
4

Similar Publications

Crimean-Congo haemorrhagic fever virus (CCHFV), a Biosafety level 4 pathogen transmitted by ticks, causes severe haemorrhagic diseases in humans but remains clinically silent in animals. Over the past forty years, Nigeria lacks comprehensive genetic data on CCHFV in livestock and ticks. This study aimed to identify and characterize CCHFV strains in cattle and their Hyalomma ticks, the primary vector, in Kwara State, Nigeria.

View Article and Find Full Text PDF

Glucocorticosteroids remain the most common pharmaceutical approach for the treatment of equine asthma but can be associated with significant side effects, including respiratory microbiome alterations. The goal of the study was to assess the impact of 2% lidocaine nebulization, a projected alternative treatment of equine asthma, on the healthy equine respiratory microbiota. A prospective, randomized, controlled, blinded, 2-way crossover study was performed, to assess the effect of 1 mg/kg 2% lidocaine (7 treatments over 4 days) on the equine respiratory microbiota compared to control horses (saline and no treatment).

View Article and Find Full Text PDF

Decoding the aroma of Rosa canina L.: Chemical composition and gene expression.

PLoS One

January 2025

Division of Biotechnology, Department of Agronomy and Plant Breeding, College of Agricultural and Natural Resources, University of Tehran, Karaj, Iran.

Objective: The aromatic profile of Rosa canina L. petals hold immense potential for the fragrance and pharmaceutical industries. This study aims to investigate the chemical composition and gene expression patterns across different floral development stages to uncover the biosynthetic pathways of floral scent.

View Article and Find Full Text PDF

Background: Multiplex genetic testing is recommended when treating nonsmall cell lung cancer. A certain percentage of test failures in RNA assays owing to poor surgical specimen quality have been documented, and fixation failure is a possible cause. At our institution, sheet-like fixation is performed to reduce fixation time.

View Article and Find Full Text PDF

spp. are common zoonotic intestinal protozoa, which can lead to serious intestinal diseases in both humans and animals through fecal-oral transmission, leading to significant economic losses and public health challenges. To reveal the prevalence of in sheep and cattle in Shanxi Province, North China, fecal samples were collected from 311 sheep, 392 dairy cattle, and 393 beef cattle from three representative counties in the northern, central, and southern regions of Shanxi Province.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!