Dynamic multilayered control of mA RNA demethylase activity.

Proc Natl Acad Sci U S A

Division of Hematology and Medical Oncology, Mays Cancer Center, University of Texas Health Science Center San Antonio, San Antonio, TX 78229.

Published: November 2024

AI Article Synopsis

  • - RNA can be chemically modified through methylation, particularly at the N6-methyladenosine (mA) site on mRNA, which is regulated by the methyltransferase complex and removed by demethylases FTO and ALKBH5.
  • - The outcome of mA-marked mRNA can either lead to its degradation or stabilization/translation, influenced largely by its interaction with specific proteins known as YTH domain-containing proteins.
  • - New insights show that factors like metabolism and posttranslational modifications can affect the functioning and location of FTO and ALKBH5, indicating that mA methylation is a dynamic process that warrants further exploration in cancer and other health conditions.

Article Abstract

Similar to DNA and histone, RNA can also be methylated. In its most common form, a N6-methyladenosine (mA) chemical modification is introduced into nascent messenger ribonucleic acid (mRNA) by a specialized methyltransferase complex and removed by the RNA demethylases, Fat mass and obesity-associated (FTO), and ALKBH5. The fate of mA-marked mRNA is uniquely diverse, ranging from degradation to stabilization/translation, which has been suggested to be largely dependent on its interaction with the family of YT521-B homology (YTH) domain-containing proteins. Here, we highlight a series of control levers that impinge on the RNA demethylases. We present evidence to indicate that intermediary metabolism and various posttranslation modifications modulate the activity, stability, and the subcellular localization of FTO and ALKBH5, further dispelling the notion that mA methylation is not a dynamic process. We also discuss how examination of these underappreciated regulatory nodes adds a more nuanced view of the role of FTO and ALKBH5 and should guide their study in cancer and nonmalignant conditions alike.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11572932PMC
http://dx.doi.org/10.1073/pnas.2317847121DOI Listing

Publication Analysis

Top Keywords

fto alkbh5
12
rna demethylases
8
dynamic multilayered
4
multilayered control
4
rna
4
control rna
4
rna demethylase
4
demethylase activity
4
activity dna
4
dna histone
4

Similar Publications

Downregulated YTHDF2 expression in systemic lupus erythematosus is associated with inflammatory and neutrophil cytokine production.

Clin Rheumatol

December 2024

Department of Clinical Laboratory, The First Affiliated Hospital, Jiangxi Medical College, Nanchang University, No.17, YongwaiZhengjie, Donghu District, Nanchang, 330006, Jiangxi, China.

Objectives: An increasing body of evidence suggests that N6-methyladenosine (m6A) plays a crucial role in the etiology of SLE. We focused on YTHDF2 expression in neutrophils and the relationship between YTHDF2 and the pathogenesis of SLE.

Methods: Sixty-one patients with SLE and 48 healthy controls (HC) were recruited, and their clinical characteristics were recorded.

View Article and Find Full Text PDF
Article Synopsis
  • - Breast cancer is the most common cancer diagnosed in women globally, characterized by its diverse molecular makeup and complex types, which pose challenges in treatment due to tumor heterogeneity and resistance.
  • - Recent research has identified nearly 200 RNA modifications, with methylation playing a crucial role in cancer development, progression, and treatment resistance, particularly the N6-methyladenosine (m6A) modification, which involves key "writers," "readers," and "erasers."
  • - The review discusses various RNA methylation types (m6A, m7G, m5C, m1A, and m3C), their effects on tumor behavior, and highlights their potential as therapeutic targets, suggesting they may enhance
View Article and Find Full Text PDF

The mRNA N-Methyladenosine Response to Dehydration in .

Animals (Basel)

November 2024

Department of Biology, Carleton University, Ottawa, ON K1S 5B6, Canada.

The African clawed frog, , exhibits remarkable adaptations to survive in its arid habitat, including behavioral and metabolic changes during periods of drought. During extreme dehydration, undergoes estivation, a state characterized by increased urea and ammonia levels, depression of the metabolic rate, and tissue hypoxia. To understand the molecular mechanisms underlying these adaptations, we investigated the potential role of N6-methyladenosine (mA), a widespread mRNA modification, in during extreme dehydration.

View Article and Find Full Text PDF

Detecting the Tumor Prognostic Factors From the YTH Domain Family Through Integrative Pan-Cancer Analysis.

Cancer Inform

November 2024

Department of Gynecology and Obstetrics, Ruijin Hospital, Center for Single-Cell Omics, School of Public Health, Shanghai Jiaotong University School of Medicine, Shanghai, China.

Objectives: Emerging evidence suggests that N6-methyladenosine (mA) methylation plays a critical role in cancers through various mechanisms. This work aims to reveal the essential role of mA methylation "readers" in regulation of cancer prognosis at the pan-cancer level.

Methods: Herein, we focused on one special protein family of the "readers" of mA methylation, YT521-B homology (YTH) domain family genes, which were observed to be frequently dysregulated in tumor tissues and closely associated with cancer prognosis.

View Article and Find Full Text PDF

Epigenetics impacts male fertility and reproductive disorders. RNA modifications, like m6A, influence RNA metabolism. Varicocele contributes to male infertility, and oxidative stress affects sperm function.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!