Probiotic model for studying rhizosphere interactions of root exudates and the functional microbiome.

ISME J

CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, Yunnan 666303, P. R. China.

Published: January 2024

Root exudates are important mediators of plant-microbiome interactions. Recent pioneering studies on various aerial root plants, including cereals, have shown that carbohydrate-rich mucilage can enrich diazotrophs and increase host nitrogen utilization and growth. Moreover, non-diazotrophic "gatekeeper" microorganisms in mucilage help defend against pathogenic and environmental microbes. These findings highlight the active role of root exudates in mediating plant-microbiome interactions to maintain microbial homeostasis in the rhizosphere. However, little is known about the specific mechanisms by which root exudates modulate the functional microbiome and homeostasis in rhizosphere microhabitats. Here, we propose the typical and stable biointeractions of four plant-specific aerial root mucilage-probiotic systems as a model for understanding root exudate-functional microbiome interaction. We anticipate that this model can provide fundamental biological insights into rhizosphere interactions.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11572495PMC
http://dx.doi.org/10.1093/ismejo/wrae223DOI Listing

Publication Analysis

Top Keywords

root exudates
16
rhizosphere interactions
8
functional microbiome
8
plant-microbiome interactions
8
aerial root
8
homeostasis rhizosphere
8
root
7
probiotic model
4
model studying
4
rhizosphere
4

Similar Publications

Background: Legumes, in the initial event of symbiosis, secrete flavonoids into the rhizosphere to attract rhizobia. This study was conducted to investigate the relationship between crop root exudates and soybean nodule development under intercropping patterns.

Method: A two years field experiments was carried out and combined with pot experiments to quantify the effects of planting mode, i.

View Article and Find Full Text PDF

Elevated CO (eCO) stimulates productivity and nutrient demand of crops. Thus, comprehensively understanding the crop phosphorus (P) acquisition strategy is critical for sustaining agriculture to combat climate changes. Here, wheat ( L) was planted in field in the eCO (550 µmol mol) and ambient CO (aCO, 415 µmol mol) environments.

View Article and Find Full Text PDF

Mangrove forests are increasingly recognized as vital blue carbon ecosystems due to their high carbon sequestration capacity, primarily through the accumulation of soil organic carbon (SOC). Recent research highlights that, in addition to SOC, dissolved inorganic carbon (DIC), particularly in the form of bicarbonate (HCO₃⁻), plays a crucial role in carbon sequestration by being exported from these ecosystems to adjacent coastal waters. This study aims to investigate the previously unexamined mechanisms behind bicarbonate production in mangrove soils.

View Article and Find Full Text PDF

Deficit irrigation differentially modulates rhizosphere microbial community and metabolites of two potato genotypes differing in drought tolerance.

J Environ Manage

December 2024

State Key Laboratory of Vegetable Biobreeding, Key Laboratory of Biology and Genetic Improvement of Tuber and Root Crop of Ministry of Agriculture and Rural Affairs of the Ministry of Agriculture and Rural Affairs, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, No.12, Zhongguancun South Street, Haidian District, Beijing, 100081, PR China.

Beneficial interactions between plant root exudates and the rhizosphere microbial community can alleviate the adverse effects of environmental stress on crop yields, but these interactions remain poorly understood in potato growing in drying soil. We investigated the responses of rhizosphere soil microorganisms and metabolites, and biochemical and physiological responses of two potato genotypes with contrasting drought tolerance (drought tolerant 'C93' and drought sensitive 'Favorita'), to two different irrigation treatments imposing contrasting soil water availability in the field. Deficit irrigation altered rhizosphere soil bacterial communities and metabolites of C93 more than Favorita.

View Article and Find Full Text PDF

Considerable biological decline of continuously cropped alfalfa may be tightly linked to rhizosphere metabolism. However, plant-soil feedbacks and age-related metabolic changes in alfalfa stands remain unexplored. The aim of this study was to identify the linkages of rhizosphere and root metabolites, particularly autotoxins and prebiotics, to alfalfa decline under continuous cropping.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!