Recent advancements in large-scale network studies have shown that connector hubs and provincial hubs are vital for coordinating complex cognitive tasks by facilitating information transfer between and within specialized modules. However, current methods for identifying these hubs often lack standardized measurement criteria, hindering quantitative analysis. This study proposes a novel computational method utilizing multi-graph theoretical index calculations to quantitatively analyze hub attributes in brain networks. Using benchmark network, random simulation network (N = 100), resting fMRI data from the ADHD-200 NYU dataset (HC = 110, ADHD = 146), and the Peking dataset (HC = 120, ADHD = 83), we introduce the Multi-criteria Quantitative Graph Analysis (MQGA) method, which employs betweenness centrality, degree centrality, and participation coefficient to determine the connector (con) hub index and provincial (pro) hub index. The method's accuracy, reliability, and stability were validated through correlation analysis of hub indices and labels, vulnerability tests, and consistency analysis across subjects. Results indicate that as network sparsity increases, the con hub index increases while the pro hub index decreases, with the optimal hub node index at 4 % sparsity. Vulnerability tests revealed that removing con nodes had a greater impact on network integrity than removing pro nodes. Both con and pro exhibited stability in consistency analyses, but con was more stable. The stability of hub scores in disease groups was significantly lower than in the healthy control group. High con values were found in the precuneus, postcentral gyrus, and precentral gyrus, whereas high pro values were identified in the precentral gyrus, postcentral gyrus, superior parietal lobule, precuneus, and superior temporal gyrus. This approach enhances the accuracy and sensitivity of hub node identification, facilitating precise comparisons and producing consistent, replicable results, advancing our understanding of brain network hub nodes, their roles in cognitive processes, and their implications for brain disease research.
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http://dx.doi.org/10.1016/j.neuroimage.2024.120913 | DOI Listing |
Curr Pharm Biotechnol
January 2025
Department of Intensive Care Unit, Affiliated Hospital of Guangdong Medical University, 524000 Zhanjiang, China.
Objectives: This study aimed to comprehensively investigate the molecular landscape of gastric cancer (GC) by integrating various bioinformatics tools and experimental validations.
Methodology: GSE79973 dataset, limma package, STRING, UALCAN, GEPIA, OncoDB, cBioPortal, DAVID, TISIDB, Gene Set Cancer Analysis (GSCA), tissue samples, RT-qPCR, and cell proliferation assay were employed in this study.
Results: Analysis of the GSE79973 dataset identified 300 differentially expressed genes (DEGs), from which COL1A1, COL1A2, CHN1, and FN1 emerged as pivotal hub genes using protein-protein interaction network analysis.
ERJ Open Res
January 2025
Centre for Human and Applied Physiological Sciences, School of Basic and Medical Biosciences, Faculty of Life Sciences and Medicine, King's College London, London, UK.
Introduction: Refractory chronic cough (RCC), persisting despite addressing contributory diagnoses, is likely underpinned by neurally mediated cough hypersensitivity. disorders are genetic neurodegenerative conditions caused by biallelic repeat expansion sequences, commonly presenting with cough, followed by neurological features including cerebellar ataxia with neuropathy and vestibular areflexia syndrome (CANVAS). The prevalence and identifying clinical characteristics of repeat-expansion disorders in patients with RCC are unknown.
View Article and Find Full Text PDFData Brief
February 2025
Department of Information & Communication Technology, University of Agder (UiA), Norway.
Hindko is a language primarily spoken in Northwestern areas of Pakistan. Approximately eight million people speak the Hindko language. According to its native speakers, it is 7 largest language of Pakistan and 2 largest language of Khyber Pakhtunkhwa.
View Article and Find Full Text PDFEJIFCC
December 2024
Alice Springs Hospital, Alice Springs, Australia.
BJPsych Bull
January 2025
Derby Psychiatry Teaching Unit, Derbyshire Healthcare NHS Foundation Trust, Derby, UK.
Patient involvement in psychiatry education struggles to be representative of the patients that doctors will treat once qualified. The issues of mental health stigma, cultural perspectives of mental health and the unique role of teaching, required exploring to establish the barriers and facilitators to increasing the diversity of patients involved in psychiatry education. To explore the causes of this lack of representation, a roundtable event with 34 delegates composed of people with lived experience of mental health issues, people from underserved communities, academics, mental health professionals and charity representatives met to discuss the barriers to involvement in psychiatry education and possible solutions.
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