Genome-Wide Identification of the Gene Family in Poplar and Their Responses to Abiotic Stresses.

Life (Basel)

College of Horticulture and Forestry Science, Hubei Engineering Technology Research Center for Forestry Information, Huazhong Agricultural University, Wuhan 430070, China.

Published: September 2024

AI Article Synopsis

  • - The gene family discussed is specific to plants and plays a crucial role in growth and stress responses, with 22 members identified in the analyzed organism's genome.
  • - Subcellular localization indicates these proteins are found in both the cell membrane and nucleus, with most containing only one of two conserved domains, and gene duplication analysis revealed fragment duplication as the primary mechanism.
  • - The study found that these genes show different expression patterns when exposed to various stress conditions, leading to the construction of a co-expression network that helps reveal their potential functions in processes like protein modification and hormone signaling in response to environmental stresses.

Article Abstract

The () gene family is a plant-specific, oligomeric, filamentous family protein located on the cell membrane, which is important for plant growth and stress responses. In this study, a total of 22 were identified in the genome of . Subcellular localization analysis showed that they were predictively distributed in the cell membrane and nucleus. Only five PtREMs members contain both Remorin_C- and Remorin_N-conserved domains, and most of them only contain the Remorin_C domain. A total of 20 gene duplication pairs were found, all of which belonged to fragment duplication. Molecular evolutionary analysis showed the have undergone purified selection. Lots of -acting elements assigned into categories of plant growth and development, stress response, hormone response and light response were detected in the promoters of . showed distinct gene expression patterns in response to diverse stress conditions where the mRNA levels of , and were induced in most cases. A co-expression network centered by was constructed to uncover the possible functions of in protein modification, microtube-based movement and hormone signaling. The obtained results shed new light on understanding the roles of in coping with environmental stresses in poplar species.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11509593PMC
http://dx.doi.org/10.3390/life14101239DOI Listing

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