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Genome-Wide Identification and Expression Analysis of the Gene Family in . | LitMetric

AI Article Synopsis

  • The text focuses on an ancient Mediterranean species known for its resilience, including traits like high-temperature tolerance and adaptability to poor soil.
  • A study identified 24 heat shock transcription factors (HSFs) from this species, revealing diverse properties and categorizing them into five main classes across nine chromosomes.
  • The research showed that these HSFs are likely involved in plant responses to heat stress and might regulate various pathways critical for plant growth, with notable differences in their expression levels when exposed to high temperatures.

Article Abstract

is an ancient remnant species from the Mediterranean displaying characteristics such as high-temperature tolerance, drought resistance, cold resistance, and adaptability to impoverished soil. In the case of high-temperature tolerance, heat shock transcription factors (HSFs) are integral transcriptional regulatory proteins exerting a critical role in cellular processes. Despite extensive research on the HSF family across various species, there has been no analysis specifically focused on . In this study, we identified 24 members of the gene family based on the genome database of , which were unevenly distributed over 9 chromosomes. Phylogenetic analysis showed that these 24 members can be categorized into 5 primary classes consisting of a total of 13 subgroups. Analysis of the physical and chemical properties revealed significant diversity among these proteins. With the exception of the AmHSFB3 protein, which is localized in the cytoplasm, all other AmHSF proteins were found to be situated in the nucleus. Comparison of amino acid sequences revealed that all AmHSF proteins contain a conserved DNA-binding domains structure, and the DNA-binding domains and oligomerization domains of the gene exhibit conservation with counterparts across diverse species; we investigated the collinearity of genes in relation to those of three other representative species. Through GO enrichment analysis, evidence emerged that genes are involved in heat stress responses and may be involved in multiple transcriptional regulatory pathways that coordinate plant growth and stress responses. Finally, through a comprehensive analysis using transcriptome data, we examined the expression levels of 24 under 45 °C. The results revealed significant differences in the expression profiles of at different time intervals during exposure to high temperatures, highlighting their crucial role in responding to heat stress. In summary, these results provide a better understanding of the role and regulatory mechanisms of HSF in the heat stress response of , meanwhile also establishing a foundation for further exploration of the biological functions of in the adversity response of

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11505871PMC
http://dx.doi.org/10.3390/cimb46100678DOI Listing

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