AI Article Synopsis
- Kunze Wiltshire 1933 is a fungus that causes leaf blotch disease in plants, and the study focused on assembling its mitochondrial genome from isolate AT-1224.
- The mitochondrial genome has a size of 57,475 bp, featuring 12 coding genes, 15 hypothetical proteins, 34 tRNA genes, and 2 rRNA genes, along with various repetitive sequences.
- Phylogenetic analysis indicated close relationships with two species and placed it in a sister clade with six other species, providing important insights for future identification and evolutionary studies related to this fungus in apple orchards.
Article Abstract
(Kunze) Wiltshire 1933 is a plant pathogenic fungus mainly causing leaf blotch disease. Here, we de novo assembled mitochondrial genome of isolate AT-1224. The total mitogenome size is 57,475 bp with 29.00% G + C content. The genome contained 12 coding genes and 15 hypothetical proteins, 34 transfer RNA (tRNA) genes and 2 ribosomal RNA (rRNA). There are 227 SSR repeats, range from 2 to 4 base pairs, most five repeats were AT (144), AAT (54), AG (33), AC (13) and AAG (5). The results also found 13 tandem repeats (>100 bp), the largest repeat were forward 2 times located from 13,405 to 20,024 bp and 25,549 to 32,168 bp. Phylogenetic analysis based on 17 species complete mitogenomes indicated that mitogenome was closest to 2 species, and sister clade to 6 species, representing , , , , and . Further analysis among common fungus in local apple orchards using mitochondrial protein-coding genes revealed were closing to 2 Alternaria fungi and a fungus representing sp. These results provide a basic reference for identification and evolution studies of on apple trees.
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| http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11500555 | PMC |
| http://dx.doi.org/10.1080/23802359.2024.2419449 | DOI Listing |
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