Characterization of the complete chloroplast genome of (Orchidaceae).

Mitochondrial DNA B Resour

Key Laboratory of South China Agricultural Plant Molecular Analysis and Genetic Improvement, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, Guangdong, China.

Published: October 2024

AI Article Synopsis

  • The text discusses a rare Chinese medicinal herb from the Orchidaceae family that has large flowers and details its complete chloroplast genome sequencing.
  • The chloroplast genome is 158,462 bp in size, has a GC content of 36.9%, and features a quadripartite structure with various gene annotations.
  • Phylogenetic analysis indicates its close relationship to two terrestrial species, providing genetic insights for future research and potential uses of the herb.

Article Abstract

is a Chinese traditional medicinal herb in the Orchidaceae family. It is a rare and special species that exhibits relatively large flowers. To illuminate its phylogenetic status and augment genomic resources, the complete chloroplast (cp) genome of was first sequenced and assembled using whole genome next-generation sequencing in this study. The cp genome size is 158,462 bp with a total GC content of 36.9%. Characterized by a quadripartite structure, the genome consists of a large single-copy (LSC) region of 86,032 bp, a small single-copy (SSC) region of 18,322 bp, which is separated by a pair of 27,054 bp inverted repeat regions (IRs). A total of 133 genes were annotated, including 87 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis strongly supported as the sister to two closely related terrestrial species, and . The results of this study provide genomic information for future research and application of this medicinal herb.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11486071PMC
http://dx.doi.org/10.1080/23802359.2024.2415134DOI Listing

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