Integrative pan-cancer analysis reveals the prognostic and immunotherapeutic value of ALKBH7 in HNSC.

Aging (Albany NY)

Department of Otolaryngology-Head and Neck Surgery, The Second Affiliated Hospital of Naval Medical University, Naval Medical University, Shanghai 200003, P.R. China.

Published: June 2024

AI Article Synopsis

  • - ALKBH7, a member of the α-ketoglutarate-dependent dioxygenase superfamily, shows varying expression across different cancers and has a significant correlation with patient prognosis, particularly in head and neck squamous cell carcinoma (HNSC).
  • - The expression levels of ALKBH7 are linked to immune cell infiltration, tumor mutational burden (TMB), microsatellite instability (MSI), homologous recombination deficiency (HRD), and DNA methylation, which may influence cancer treatment responses.
  • - In HNSC, reduced ALKBH7 was observed in tumor tissues, and laboratory experiments suggested its potential protective role against cancer cell migration, invasion, and proliferation, making it a candidate biom

Article Abstract

The AlkB homolog 7 (ALKBH7) is a nonheme iron (II) α-ketoglutarate-dependent dioxygenase superfamily member, which may affect the progression of several types of human cancer. However, the biological effect, especially the immune-related effect, of ALKBH7 in HNSC remains unclear. Herein, several databases were employed at first to assess the different expression of ALKBH7 as well as their relationship to the prognosis, RNA modification, DNA methylation modulation, immune microenvironment and chemotherapeutic responses of various types of cancers. We found that ALKBH7 was expressed differentially in pan-cancer, and correlated with a satisfied prognosis especially in HNSC. The expression of ALKBH7 was also associated with the level of immune cell infiltration, TMB, MSI, HRD, MMR deficiency, and DNA methyltransferases in a wide variety of cancers, which might be potentially related to the responses against chemotherapeutic agents. Next, the role of ALKBH7 in HNSC was further investigated. Western blot and immunohistochemical analysis in HNSC patients from the NMU cohort showed the reduced ALKBH7 expression level in tumor tissues. experiments of cell migration, invasion, and proliferation showed a potential protective effect of ALKBH7 in HNSC. Collectively, ALKBH7 might play a protective role in the development and progression of multiple cancers by affecting the metabolism and immune cell infiltration, especially HNSC, which could be a potential biomarker to predict prognosis and chemotherapeutic response.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11501379PMC
http://dx.doi.org/10.18632/aging.205981DOI Listing

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Integrative pan-cancer analysis reveals the prognostic and immunotherapeutic value of ALKBH7 in HNSC.

Aging (Albany NY)

June 2024

Department of Otolaryngology-Head and Neck Surgery, The Second Affiliated Hospital of Naval Medical University, Naval Medical University, Shanghai 200003, P.R. China.

Article Synopsis
  • - ALKBH7, a member of the α-ketoglutarate-dependent dioxygenase superfamily, shows varying expression across different cancers and has a significant correlation with patient prognosis, particularly in head and neck squamous cell carcinoma (HNSC).
  • - The expression levels of ALKBH7 are linked to immune cell infiltration, tumor mutational burden (TMB), microsatellite instability (MSI), homologous recombination deficiency (HRD), and DNA methylation, which may influence cancer treatment responses.
  • - In HNSC, reduced ALKBH7 was observed in tumor tissues, and laboratory experiments suggested its potential protective role against cancer cell migration, invasion, and proliferation, making it a candidate biom
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