Effective patchiness from critical points of a coarse-grained protein model with explicit shape and charge anisotropy.

Soft Matter

Institute for Applied Physics, University of Tübingen, Auf der Morgenstelle 10, 72076 Tübingen, Germany.

Published: October 2024

AI Article Synopsis

  • * When considering protein interactions with anisotropic models (like the Kern-Frenkel patchy particle model), criteria for stability shift, depending on the protein's structure and patchiness.
  • * A study on the protein bovine serum albumin (BSA) shows that increasing charge-anisotropy raises the critical temperature and highlights challenges in applying colloidal theory to shape-anisotropic models.

Article Abstract

Colloidal model systems are successful in rationalizing emergent phenomena like aggregation, rheology and phase behaviour of protein solutions. Colloidal theory in conjunction with isotropic interaction models is often employed to estimate the stability of such solutions. In particular, a universal criterion for the reduced second virial coefficient at the critical point is frequently invoked which is based on the behavior of short-range attractive fluids (Noro-Frenkel rule, ). However, if anisotropic models for the protein-protein interaction are considered, the Kern-Frenkel (KF) patchy particle model, the value of the criterion is shifted to lower values and explicitly depends on the number of patches. If an explicit shape anisotropy is considered, as in a coarse-grained protein model, the normalization of becomes ambiguous to some extent, as no unique exclusion volume can be defined anymore. Here, we investigate a low-resolution, coarse-grained model for the globular protein bovine serum albumin (BSA) and study effects of charge-anisotropy on the phase diagram (determined by simulations) at the isoelectric point. We present methods of assigning an "effective patchiness" to our protein model by comparing its critical properties to the KF model. We find that doubling the native charges increases the critical temperature by ≈14% and that our BSA model can be compared to a 3 to 5 patch KF model. Finally, we argue that applying existing criteria from colloidal theory should be done with care, due to multiple, physically plausible ways of how to assign effective diameters to shape-anisotropic models.

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Source
http://dx.doi.org/10.1039/d4sm00867gDOI Listing

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