Single-Cell Sequencing Combined with Transcriptome Sequencing to Explore the Molecular Mechanisms Related to Psoriasis.

Clin Cosmet Investig Dermatol

Department of Dermatology, Renmin Hospital, Hubei University of Medicine, Shiyan, People's Republic of China.

Published: October 2024

AI Article Synopsis

  • Psoriasis is a chronic inflammatory skin disease with no complete cure, and this study aims to delve deeper into its molecular mechanisms to better understand its development.
  • Researchers analyzed gene expression data from psoriasis patients using R software to identify key differentially expressed genes and performed various analyses, including Drug Target Prediction.
  • The study identified 14 key genes related to immune and metabolic pathways, suggesting potential drug targets and providing insights that could lead to new treatment approaches for psoriasis.

Article Abstract

Background: Psoriasis, a chronic and recurrent inflammatory skin disease, current treatments can only alleviate its symptoms. There is still no complete cure. Although increasing research supports the therapeutics to be better, the common mechanism of its occurrence is still not fully elucidated. Our study is about further explore the molecular mechanism of the occurrence of this disease.

Methods: The gene expression profiles of psoriasis (GSE151177, GSE41664, GSE30999) were downloaded from the Gene Expression Omnibus (GEO) database. After identifying the common differentially expressed genes (DEGs) of psoriasis using R software, three kinds of analyses were performed, namely WGCNA, GWAS Analysis, Drug Target Prediction.

Results: A total of 14 common DEGs was selected for subsequent analyses. Our Drug Target Prediction analysis revealed that the expression profiles influenced by certain drugs, including methotrexate, budesonide, amino purvalanol-a, and selumetinib, exhibited negative correlations with the disease-perturbed expression profiles. Finally, It was found that S100A4, JAML, TRAF3IP3, MIAT, IL7R, and KLRB1 were prominently expressed in the immune pathway related to allograft rejection. In the metabolic pathway, oxidative phosphorylation showed high expression levels, while the reactive oxygen species pathway was notably expressed in the signaling pathways domain.

Conclusion: Our study reveals the potential drugs and pathogenesis of psoriasis. These potential pathway and hub genes may provide new ideas for further mechanism research.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11457778PMC
http://dx.doi.org/10.2147/CCID.S484034DOI Listing

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