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Integrated bioinformatics reveals genetic links between visceral obesity and uterine tumors. | LitMetric

AI Article Synopsis

  • - Visceral obesity (VO) is linked to increased risks for both benign uterine leiomyoma (ULM) and malignant uterine leiomyosarcoma (ULS), but the specific molecular mechanisms connecting these conditions remain largely unknown.
  • - This study used bioinformatics to analyze gene expression data and found 37 overlapping differentially expressed genes (DEGs) among VO, ULM, and ULS, with implications for cell proliferation and immune responses.
  • - The research identified 14 key hub genes, including TOP2A, APOE, and TYMS, and revealed 26 FDA-approved drugs that could potentially target these genes, suggesting new avenues for treatment that need further experimental validation.

Article Abstract

Visceral obesity (VO), characterized by excess fat around internal organs, is a recognized risk factor for gynecological tumors, including benign uterine leiomyoma (ULM) and malignant uterine leiomyosarcoma (ULS). Despite this association, the shared molecular mechanisms remain underexplored. This study utilizes an integrated bioinformatics approach to elucidate common molecular pathways and identify potential therapeutic targets linking VO, ULM, and ULS. We analyzed gene expression datasets from the Gene Expression Omnibus (GEO) to identify differentially expressed genes (DEGs) in each condition. We found 101, 145, and 18 DEGs in VO, ULM, and ULS, respectively, with 37 genes overlapping across all three conditions. Functional enrichment analysis revealed that these overlapping DEGs were significantly enriched in pathways related to cell proliferation, immune response, and transcriptional regulation, suggesting shared biological processes. Protein-protein interaction network analysis identified 14 hub genes, of which TOP2A, APOE, and TYMS showed significant differential expression across all three conditions. Drug-gene interaction analysis identified 26 FDA-approved drugs targeting these hub genes, highlighting potential therapeutic opportunities. In conclusion, this study uncovers shared molecular pathways and actionable drug targets across VO, ULM, and ULS. These findings deepen our understanding of disease etiology and offer promising avenues for drug repurposing. Experimental validation is needed to translate these insights into clinical applications and innovative treatments.

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Source
http://dx.doi.org/10.1007/s00438-024-02184-9DOI Listing

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