AtmoSpec-A Tool to Calculate Photoabsorption Cross-Sections for Atmospheric Volatile Organic Compounds.

J Phys Chem A

Centre for Computational Chemistry, School of Chemistry, University of Bristol, Cantocks Close, Bristol BS8 1TS, United Kingdom.

Published: October 2024

Characterizing the photolysis processes undergone by transient volatile organic compounds (VOCs) in the troposphere requires the knowledge of their photoabsorption cross-section-quantities often challenging to determine experimentally, particularly due to the reactivity of these molecules. We present a computational tool coined AtmoSpec, which can predict a quantitative photoabsorption cross-section for volatile organic compounds by using computational photochemistry. The user enters the molecule of interest as a SMILES code and, after selecting a level of theory for the electronic structure (and waiting for the calculations to take place), is presented with a photoabsorption cross-section for the low-energy conformers and an estimate of the photolysis rate coefficient for different standardized actinic fluxes. More specifically, AtmoSpec is an automated workflow for the nuclear ensemble approach, an efficient technique to approximate the absolute intensities and excitation wavelengths of a photoabsorption cross-section for a molecule in the gas phase of interest in atmospheric chemistry and astrochemistry. This work provides background information on the nuclear ensemble approach, a guided example of a typical AtmoSpec calculation, details about the architecture of the code, and the current limitations and future developments of this tool.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11457220PMC
http://dx.doi.org/10.1021/acs.jpca.4c05174DOI Listing

Publication Analysis

Top Keywords

volatile organic
12
organic compounds
12
photoabsorption cross-section
12
nuclear ensemble
8
ensemble approach
8
photoabsorption
5
atmospec-a tool
4
tool calculate
4
calculate photoabsorption
4
photoabsorption cross-sections
4

Similar Publications

Background: Type 2 Diabetes Mellitus (T2DM) is a significant public health burden. Emerging evidence links volatile organic compounds (VOCs), such as benzene to endocrine disruption and metabolic dysfunction. However, the effects of chronic environmentally relevant VOC exposures on metabolic health are still emerging.

View Article and Find Full Text PDF

Recent Advances of the Effect of HO on VOC Oxidation over Catalysts: Influencing Factors, Inhibition/Promotion Mechanisms, and Water Resistance Strategies.

Environ Sci Technol

January 2025

Center for Excellence in Regional Atmospheric Environment, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, P.R. China.

Water vapor is a significant component in real volatile organic compounds (VOCs) exhaust gas and has a considerable impact on the catalytic performance of catalysts for VOC oxidation. Important progress has been made in the reaction mechanisms of HO and water resistance strategies for VOC oxidation in recent years. Despite advancements in catalytic technology, most catalysts still exhibit low activity under humid conditions, presenting a challenge in reducing the adverse effects of HO on VOC oxidation.

View Article and Find Full Text PDF

The role and progress of zeolites in photocatalytic materials.

Environ Res

January 2025

Xi'an Key Laboratory of Advanced Photo-Electronics Materials and Energy Conversion Device, Technological Institute of Materials & Energy Science (TIMES), Xijing University, Xi'an 710123, PR China; School of Artificial Intelligence, Optics and Electronics (iOPEN), Northwestern Polytechnical University, Xi'an 710072, Shaanxi, PR China. Electronic address:

This paper focuses on the research background of zeolite-based photocatalytic materials, the role of zeolites in photocatalytic materials, and their application in various fields. It focuses on the critical roles of zeolites in photocatalytic materials and their application prospects. It outlines the mechanisms of zeolites in different photocatalytic materials, including adsorption, structural stabilization, domain-limiting, electric field, catalysis, ion exchange, shape-selective, and solvation, which elucidates the potential advantages of zeolites in photocatalytic materials.

View Article and Find Full Text PDF

Olfaction with legs-Spiders use wall-pore sensilla for pheromone detection.

Proc Natl Acad Sci U S A

January 2025

General and Systematic Zoology, Zoological Institute and Museum, University of Greifswald, Greifswald 17489, Germany.

The sense of smell is a central sensory modality of most terrestrial species. However, our knowledge of olfaction is based on vertebrates and insects. In contrast, little is known about the chemosensory world of spiders and nothing about how they perform olfaction despite their important ecological role.

View Article and Find Full Text PDF

The detection of skeletal remains using human remain detection dogs (HRD) is often reported anecdotally by handlers to be a challenge. Limited studies have been conducted to determine the volatile organic compounds (VOCs) emitted from bones, particularly when there is limited organic matter remaining. This study aimed to determine the VOCs emitted from dry, weathered bones and examine the detection performance of HRD dogs on these bones when used as training aids.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!