AI Article Synopsis

  • Adzuki bean (Vigna angularis) is an important legume in East Asia, valued for both its dietary and medicinal uses, and this study presents a detailed chromosome-level genome assembly of the plant.
  • The genome assembly covers 447.8 Mb, identifying over 25,000 genes with high accuracy, and demonstrates significant completion with the majority of essential genes recognized.
  • The study also places Vigna angularis within an evolutionary context, tracing its divergence from related species around 15.3 and 8.7 million years ago, which can aid in improving adzuki bean breeding techniques.

Article Abstract

Adzuki bean (Vigna angularis) is a significant dietary legume crop that is prevalent in East Asia. It also holds traditional medicinal importance in China. In this study, we report a high-quality, chromosome-level genome assembly of adzuki bean obtained by employing Illumina short-read sequencing, PacBio long-read sequencing, and Hi-C technology. The assembly spans 447.8 Mb, encompassing 96.32% of the estimated genome, with contig and scaffold N50 values of 16.5 and 41.0 Mb, respectively. More than 98.2% of the 1,614 BUSCO genes were fully identified, and 25,939 genes were annotated, with 98.23% of them being functionally identifiable. Vigna angularis was estimated to diverge successively from Vigna unguiculata and Vigna radiata about 15.3 and 8.7 million years ago (Ma), respectively. This chromosome-level reference genome of Vigna angularis provides a robust foundation for exploring the functional genomics and genome evolution of adzuki bean, thereby facilitating advancements in molecular breeding of adzuki bean.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11446921PMC
http://dx.doi.org/10.1038/s41597-024-03911-yDOI Listing

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