The Proteasome-Family-Members-Based Prognostic Model Improves the Risk Classification for Adult Acute Myeloid Leukemia.

Biomedicines

Shanghai Institute of Hematology, State Key Laboratory of Medical Genomics, National Research Center for Translational Medicine at Shanghai, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, 197 Ruijin Er Rd., Shanghai 200025, China.

Published: September 2024

AI Article Synopsis

  • The diversity of molecular and cytogenetic variations in acute myeloid leukemia (AML) highlights the need for improved risk assessment to guide prognosis and therapy.
  • Research focused on the role of 49 proteasome family members (PSMs) in AML, using data from various databases to analyze their expression and survival significance.
  • A model was developed from three key PSMs to predict overall survival (OS) for adult AML patients, showing that higher risk scores correlated with poorer outcomes and could enhance existing risk stratification systems and treatment decisions.

Article Abstract

The accumulation of diverse molecular and cytogenetic variations contributes to the heterogeneity of acute myeloid leukemia (AML), a cluster of hematologic malignancies that necessitates enhanced risk evaluation for prognostic prediction and therapeutic guidance. The ubiquitin-proteasome system plays a crucial role in AML; however, the specific contributions of 49 core proteasome family members (PSMs) in this context remain largely unexplored. The expression and survival significance of 49 PSMs in AML were evaluated using the data from BeatAML2.0, TCGA, and the GEO database, mainly through the K-M plots, differential genes enrichment analysis, and candidate compounds screening via R language and statistical software. we employed LASSO and Cox regression analyses and developed a model comprising three PSMs (, , and ) aimed at predicting OS in adult AML patients, utilizing expression profiles from the BeatAML2.0 training datasets. Patients with higher risk scores were predominantly found in the AML-M2 subtype, exhibited poorer ELN stratification, showed no complete remission following induction therapies, and had a higher mortality status. Consistently, significantly worse OS was observed in high-risk patients across both the training and three validation datasets, underscoring the robust predictive capability of the three-PSMs model for AML outcomes. This model elucidated the distinct genetic abnormalities landscape between high- and low-risk groups and enhanced the ELN risk stratification system. Ultimately, the three-PSMs risk score captured AML-specific gene expression signatures, providing a molecular basis for selecting potential therapeutic agents. In summary, these findings manifested the significant potential of the PSM model for predicting AML survival and informed treatment strategies.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11429122PMC
http://dx.doi.org/10.3390/biomedicines12092147DOI Listing

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