Machine Learning in FTIR Spectrum for the Identification of Antibiotic Resistance: A Demonstration with Different Species of Microorganisms.

Antibiotics (Basel)

São Carlos Institute of Physics, University of São Paulo, Avenida Trabalhador São-Carlense No. 400, Parque Arnold Schimidt, São Carlos CEP 13566-590, SP, Brazil.

Published: August 2024

AI Article Synopsis

  • Recent studies emphasize the role of machine learning algorithms in identifying antibiotic resistance in microorganisms, demonstrating their potential in research.
  • The study presents a methodology that analyzes FTIR spectral profiles of different bacterial species, focusing on biomolecules like Carbohydrates, Fatty Acids, and Proteins, which can reliably identify resistance patterns across both Gram-positive and Gram-negative bacteria.
  • Findings suggest that this machine learning-based approach offers a versatile and precise tool for rapid identification of antimicrobial resistance, which is essential for improving treatment strategies and combating the spread of resistant infections.

Article Abstract

Recent studies introduced the importance of using machine learning algorithms in research focused on the identification of antibiotic resistance. In this study, we highlight the importance of building solid machine learning foundations to differentiate antimicrobial resistance among microorganisms. Using advanced machine learning algorithms, we established a methodology capable of analyzing the FTIR structural profile of the samples of and (Gram-positive), as well as and (Gram-negative), demonstrating cross-sectional applicability in this focus on different microorganisms. The analysis focuses on specific biomolecules-Carbohydrates, Fatty Acids, and Proteins-in FTIR spectra, providing a multidimensional database that transcends microbial variability. The results highlight the ability of the method to consistently identify resistance patterns, regardless of the Gram classification of the bacteria and the species involved, reinforcing the premise that the structural characteristics identified are universal among the microorganisms tested. By validating this approach in four distinct species, our study proves the versatility and precision of the methodology used, in addition to bringing support to the development of an innovative protocol for the rapid and safe identification of antimicrobial resistance. This advance is crucial for optimizing treatment strategies and avoiding the spread of resistance. This emphasizes the relevance of specialized machine learning bases in effectively differentiating between resistance profiles in Gram-negative and Gram-positive bacteria to be implemented in the identification of antibiotic resistance. The obtained result has a high potential to be applied to clinical procedures.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11428736PMC
http://dx.doi.org/10.3390/antibiotics13090821DOI Listing

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