The NIST gas chromatographic retention index database is widely used in gas chromatography-mass spectrometry analysis. For many compounds, the NIST database contains many entries that are presumably obtained independently of each other. We showed with specific examples that there are cases in the NIST database where several entries exist for the same compound, and all of them are equally erroneous (an error of more than 100 units). In particular, we demonstrated that all retention index values for such an important compound as imidazole for non-polar stationary phases in the NIST database are erroneous. In addition to imidazole, a similar situation is observed for four more nitrogen-containing heterocyclic compounds. For certainty, measurements were performed under several conditions, using various temperature programs, and using two specimens of columns. The structures were confirmed using nuclear magnetic resonance and mass spectrometry. It was shown with specific examples that many values are not reliable: either data were obtained using standard samples of undescribed origin without confirmation (without even using mass spectrometry) or, in some cases, standard samples were not used at all, and the retention index was obtained for a mixture component identified using a mass spectral library search. Some "independent" values are not such but are repeated publications of the same data (secondary sources), or simply several values taken from the same source. In the work, an analysis was carried out and assumptions were made about how several equally incorrect retention index values could appear in the NIST database.
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http://dx.doi.org/10.1007/s00216-024-05562-9 | DOI Listing |
BMC Womens Health
January 2025
Department of General Surgery, İstanbul Faculty of Medicine, İstanbul University, İstanbul, 34093, Türkiye.
Background: The Bahçeşehir population-based mammography screening program (BMSP) is an example of Türkiye's first population-based screening program. This study aims to reveal the successful implementation of population-based secreening program in one of the low- and middle-income countries, Türkiye and long-term results of patients diagnosed with breast cancer during BMSP.
Methods: This study was conducted between 2009 and 2019, in the Bahçeşehir county of Istanbul.
J Biomed Inform
January 2025
Harvard Medical School, Boston, MA, USA; VA Boston Healthcare System, Boston, MA, USA; Harvard T.H. Chan School of Public Health, Boston, MA, USA. Electronic address:
Motivation: The increasing availability of electronic health record (EHR) systems has created enormous potential for translational research. Recent developments in representation learning techniques have led to effective large-scale representations of EHR concepts along with knowledge graphs that empower downstream EHR studies. However, most existing methods require training with patient-level data, limiting their abilities to expand the training with multi-institutional EHR data.
View Article and Find Full Text PDFVaccine
January 2025
Center for Biologics Evaluation and Research, US Food and Drug Administration, 10903 New Hampshire Avenue, Silver Spring, MD 20993, USA. Electronic address:
Unlabelled: Neuraminidase (NA)-specific antibodies contribute to immunity against influenza. While studies have demonstrated increased NA inhibiting (NAI) antibody titers after vaccination with egg-derived inactivated influenza vaccines (eIIV), the response to cell culture-derived (c) IIV has not been reported.
Methods: An immunogenicity sub-study was performed within a clinical trial comparing the effectiveness of egg, cell, and recombinant hemagglutinin (HA)-derived influenza vaccines during the 2018-2019 and 2019-2020 influenza seasons.
Proteins
January 2025
Department of Chemistry, Indian Institute of Technology Bombay, Mumbai, India.
Short-length peptides are used as therapeutics due to their high target specificity and low toxicity; for example, peptides are designed for targeting the interaction between oncogenic protein p53 and E3 ubiquitin ligase MDM2. These peptide therapeutics form a class of successful inhibitors. To design such peptide-based inhibitors, stapling is one of the methods in which amino acid side chains are stitched together to get conformationally rigid peptides, ensuring effective binding to their partners.
View Article and Find Full Text PDFCommun Med (Lond)
January 2025
International Research Center for Neurointelligence, The University of Tokyo, Tokyo, Japan.
Background: In-person interaction offers invaluable benefits to people. To guarantee safe in-person activities during a COVID-19 outbreak, effective identification of infectious individuals is essential. In this study, we aim to analyze the impact of screening with antigen tests in schools and workplaces on identifying COVID-19 infections.
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