AI Article Synopsis
- Certain species, including strain Chen 4, play key roles as pathogens affecting plants and animals.
- A comprehensive genome sequencing of strain Chen 4 was performed using advanced sequencing technology, resulting in a genome size of 41.25 Mb and an assembly into 150 contigs.
- The study identified over 14,000 protein-encoding genes, with a significant number being putative effectors, enhancing resources for research on evolution and plant-host interactions.
Article Abstract
species are distributed globally, with certain members playing significant roles as plant and animal pathogens. Chen 4 has been identified as a pathogenic isolate responsible for causing root rot on . Here, a comprehensive genome-wide sequence of strain Chen 4 utilizing the Illumina NovaSeq sequencing platform and a Pacific Biosciences Sequel sequencing platform is presented. The genome of strain Chen 4 was assembled into 150 contigs containing a combined size of 41.25 Mb, N50 value of 1,717,859 bp and N90 value of 431,829 bp. Genome annotation revealed 14,077 protein-encoding genes and 364 of the 1016 predicted proteins were putative effectors. The present work enriches the genetic resources of for studying its evolution and can contribute to a better understanding of -host interaction.
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| http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11424785 | PMC |
| http://dx.doi.org/10.1016/j.dib.2024.110930 | DOI Listing |
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