Characterization and phylogenetic analysis of the complete mitochondrial genome of assembled using next-generation sequencing.

Mitochondrial DNA B Resour

Yunnan Province Key Laboratory for Porcine Gene Editing and Xenotransplantation, Yunnan Agricultural University, Kunming, China.

Published: September 2024

AI Article Synopsis

  • * This mitogenome includes 14 protein-coding genes, 2 transfer RNA genes, and 2 ribosomal RNA genes, with a high AT% content of 67.7%.
  • * Phylogenetic analysis revealed close relationships between this jellyfish species and others, contributing to better understanding of jellyfish taxonomy and evolution.

Article Abstract

In this study, the complete mitochondrial genome (mitogenome) of (Scyphozoa; Rhizostomeae; Cepheidae) was assembled by the next-generation sequencing data. The complete mitogenome spanned 16,590 bp and contained 14 protein-coding genes, two transfer RNA genes, and two ribosomal RNA genes. Total AT% content was 67.7%, comprising A 30.22%, C 16.16%, G 17.05%, and T 36.56%. The gene arrangement exhibited consistency with the known mitogenomes of other jellyfish species. Furthermore, the phylogenetic relationship of was investigated based on analysis of the 13 common protein-coding genes. Results indicated a close relationship between and both and . These findings provide a valuable reference for advancing understanding of the phylogenetic relationships, taxonomic classification, and phylogeography of jellyfish species.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11425685PMC
http://dx.doi.org/10.1080/23802359.2024.2406928DOI Listing

Publication Analysis

Top Keywords

complete mitochondrial
8
mitochondrial genome
8
assembled next-generation
8
next-generation sequencing
8
protein-coding genes
8
rna genes
8
jellyfish species
8
characterization phylogenetic
4
phylogenetic analysis
4
analysis complete
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!