Physics-Informed Graph Neural Networks to solve 1-D equations of blood flow.

Comput Methods Programs Biomed

Mines Saint-Etienne, Univ Jean Monnet, INSERM, U 1059, Sainbiose, F-42023, France. Electronic address:

Published: December 2024

Background And Objective: Computational models of hemodynamics can contribute to optimizing surgical plans, and improve our understanding of cardiovascular diseases. Recently, machine learning methods have become essential to reduce the computational cost of these models. In this study, we propose a method that integrates 1-D blood flow equations with Physics-Informed Graph Neural Networks (PIGNNs) to estimate the propagation of blood flow velocity and lumen area pulse waves along arteries.

Methods: Our methodology involves the creation of a graph based on arterial topology, where each 1-D line represents edges and nodes in the blood flow analysis. The innovation lies in decoding the mathematical data connecting the nodes, where each node has velocity and lumen area pulse waveform outputs. The training protocol for PIGNNs involves measurement data, specifically velocity waves measured from inlet and outlet vessels and diastolic lumen area measurements from each vessel. To optimize the learning process, our approach incorporates fundamental physical principles directly into the loss function. This comprehensive training strategy not only harnesses the power of machine learning but also ensures that PIGNNs respect fundamental laws governing fluid dynamics.

Results: The accuracy was validated in silico with different arterial networks, where PIGNNs achieved a coefficient of determination (R) consistently above 0.99, comparable to numerical methods like the discontinuous Galerkin scheme. Moreover, with in vivo data, the prediction reached R values greater than 0.80, demonstrating the method's effectiveness in predicting flow and lumen dynamics using minimal data.

Conclusions: This study showcased the ability to calculate lumen area and blood flow rate in blood vessels within a given topology by seamlessly integrating 1-D blood flow with PIGNNs, using only blood flow velocity measurements. Moreover, this study is the first to compare the PIGNNs method with other classic Physics-Informed Neural Network (PINNs) approaches for blood flow simulation. Our findings highlight the potential to use this cost-effective and proficient tool to estimate real-time arterial pulse waves.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.cmpb.2024.108427DOI Listing

Publication Analysis

Top Keywords

blood flow
32
lumen area
16
blood
9
flow
9
physics-informed graph
8
graph neural
8
neural networks
8
machine learning
8
1-d blood
8
networks pignns
8

Similar Publications

Background Aims: Bulevirtide (BLV) is a novel and the only approved treatment option for patients with chronic hepatitis D (CHD). BLV alleviates liver inflammation already early during treatment when only minor HDV RNA changes are observed. We hypothesized that BLV-treatment may influence immune cells in CHD patients and performed a high-resolution analysis of natural killer (NK) cells before and during BLV-therapy.

View Article and Find Full Text PDF

The study presents a numerical parametric investigation of flow structures in channels with a longitudinal-radial profile zR = Const and a spherical dome at the base. The goal of the study was to examine the flow structures in these channels depending on the exponent N of the profile and the height of the dome, to determine the conditions that provide optimal centripetal swirling flow, analogous to blood flow in the heart chambers and major vessels. The investigation was conducted using a comparative analysis of flow structures in channel configurations zR = Const, carried out in two stages.

View Article and Find Full Text PDF

Key Structural Features of Microvascular Networks Leading to the Formation of Multiple Equilibria.

Bull Math Biol

January 2025

Wolfson Centre for Mathematical Biology, Mathematical Institute, University of Oxford, Woodstock Rd, Oxford, Oxfordshire, OX2 6GG, UK.

We analyse mathematical models of blood flow in two simple vascular networks in order to identify structural features that lead to the formation of multiple equilibria. Our models are based on existing rules for blood rheology and haematocrit splitting. By performing bifurcation analysis on these simple network flow models, we identify a link between the changing flow direction in key vessels and the existence of multiple equilibria.

View Article and Find Full Text PDF

Microfluidic vessel-on-chip platform for investigation of cellular defects in venous malformations and responses to various shear stress and flow conditions.

Lab Chip

January 2025

Oulu Center for Cell-Matrix Research, Biocenter Oulu and Faculty of Biochemistry and Molecular Medicine, University of Oulu, P.O. Box 5000, FI-90014 Oulu, Finland.

A novel microfluidic platform was designed to study the cellular architecture of endothelial cells (ECs) in an environment replicating the 3D organization and flow of blood vessels. In particular, the platform was constructed to investigate EC defects in slow-flow venous malformations (VMs) under varying shear stress and flow conditions. The platform featured a standard microtiter plate footprint containing 32 microfluidic units capable of replicating wall shear stress (WSS) in normal veins and enabling precise control of shear stress and flow directionality without the need for complex pumping systems.

View Article and Find Full Text PDF

Imaging of the Placenta.

Clin Obstet Gynecol

March 2025

Department of Obstetrics, Gynecology and Reproductive Sciences, School of Medicine, University of Maryland, College Park, Maryland.

Placental imaging is crucial in prenatal care, offering insights into both normal and abnormal pregnancies. Traditional methods like grayscale ultrasound and magnetic resonance imaging evaluate placental anatomy, whereas Doppler ultrasound is used for functional assessment. Recent advancements include functional magnetic resonance imaging and advanced Doppler software for demonstrating placental density and visualizing spiral arteries.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!