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In silico design of multi-epitope adhesin protein vaccines. | LitMetric

In silico design of multi-epitope adhesin protein vaccines.

Heliyon

Discipline of Medical Microbiology, School of Laboratory Medicine and Medical Sciences, College of Health Science, University of KwaZulu-Natal, South Africa.

Published: September 2024

AI Article Synopsis

  • - Mtb adhesin proteins are being explored as potential components for creating effective subunit vaccines, designed using advanced immunoinformatic tools to assess their antigenic properties.
  • - A selection of four key proteins (tnHSP70, lpqH, MTP, and PstS1) was made based on their known epitopes, and various software was used to identify B- and T-cell epitopes while analyzing population-specific coverage.
  • - The study focuses on generating stable, hydrophilic tri-fusion proteins that lack allergenicity, with plans for further cloning and expression of these promising vaccine candidates for testing and potential development.

Article Abstract

(Mtb) adhesin proteins are promising candidates for subunit vaccine design. Multi-epitope Mtb vaccine and diagnostic candidates were designed using immunoinformatic tools. The antigenic potential of 26 adhesin proteins were determined using VaxiJen 2.0. The truncated heat shock protein 70 (tnHSP70), 19 kDa antigen lipoprotein (lpqH), Mtb curli pili (MTP), and Phosphate transport protein S1 (PstS1) were selected based on the number of known epitopes on the Immune Epitope Database (IEDB). B- and T-cell epitopes were identified using BepiPred2.0, ABCpred, SVMTriP, and IEDB, respectively. Population coverage was analysed using prominent South African specific alleles on the IEDB. The allergenicity, physicochemical characteristics and tertiary structure of the tri-fusion proteins were determined. The in silico immune simulation was performed using C-ImmSim. Three truncated sequences, with predicted B and T cell epitopes, and without allergenicity or signal peptides were linked by three glycine-serine residues, resulting in the stable, hydrophilic molecules, tnlpqH-tnPstS1-tnHSP70 (64,86 kDa) and tnMTP-tnPstS1-tnHSP70 (63,96 kDa). Restriction endonuclease recognition sequences incorporated at the N- and C-terminal ends of each construct, facilitated virtual cloning using Snapgene, into pGEX6P-1, resulting in novel, highly immunogenic vaccine candidates (0,912-0,985). Future studies will involve the cloning, recombinant protein expression and purification of these constructs for downstream applications.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11422057PMC
http://dx.doi.org/10.1016/j.heliyon.2024.e37536DOI Listing

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