3D-Based RNA Function Prediction Tools in rnaglib.

Methods Mol Biol

School of Computer Science, McGill University, Montréal, QC, Canada.

Published: September 2024

Understanding the connection between complex structural features of RNA and biological function is a fundamental challenge in evolutionary studies and in RNA design. However, building datasets of RNA 3D structures and making appropriate modeling choices remain time-consuming and lack standardization. In this chapter, we describe the use of rnaglib, to train supervised and unsupervised machine learning-based function prediction models on datasets of RNA 3D structures.

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Source
http://dx.doi.org/10.1007/978-1-0716-4079-1_10DOI Listing

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