Artificial intelligence-based analysis of behavior and brain images in cocaine-self-administered marmosets.

J Neurosci Methods

College of Pharmacy, Chungbuk National University, 194-31 Osongsaengmyeong 1-ro, Osong-eup, Heungdeok-gu, Cheongju-si, Chungcheongbuk-do 28160, Republic of Korea. Electronic address:

Published: December 2024

AI Article Synopsis

  • - The study explores using non-human primates (NHPs) to understand cocaine self-administration while addressing ethical concerns and employing AI methods for data analysis due to challenges in acquiring NHPs for research.
  • - Researchers used a model called Random Forest to predict cocaine dependence in marmosets, achieving a high accuracy with an area under the curve (AUC) of 0.92, and identified key variables influencing dependence using SHapley Additive exPlanations (SHAP).
  • - Additionally, a separate algorithm was developed for analyzing PET images related to dopamine transporter availability, achieving impressive segmentation accuracy of 0.97, highlighting AI's effectiveness for this type of biomedical imaging in primate studies.

Article Abstract

Background: The sophisticated behavioral and cognitive repertoires of non-human primates (NHPs) make them suitable subjects for studies involving cocaine self-administration (SA) schedules. However, ethical considerations, adherence to the 3Rs principle (replacement, reduction and refinement), and other factors make it challenging to obtain NHPs individuals for research. Consequently, there is a need for methods that can comprehensively analyze small datasets using artificial intelligence (AI).

New Methods: We employed AI to identify cocaine dependence patterns from collected data. First, we collected behavioral data from cocaine SA marmosets (Callithrix jacchus) to develop a dependence prediction model. SHapley Additive exPlanations (SHAP) values were used to demonstrate the importance of various variables. Additionally, we collected positron emission tomographic (PET) images showing dopamine transporter (DAT) binding potential and developed an algorithm for PET image segmentation.

Results: The prediction model indicated that the Random Forest (RF) algorithm performed best, with an area under the curve (AUC) of 0.92. The top five variables influencing the model were identified using SHAP values. The PET image segmentation model achieved an accuracy of 0.97, a mean squared error of 0.02, an intersection over union (IoU) of 0.845, and a Dice coefficient of 0.913.

Comparison With Existing Methods And Conclusion: Utilizing data from the marmoset SA experiment, we developed an ML-based dependence prediction model and analyzed variable importance rankings using SHAP. AI-based imaging segmentation methods offer a valuable tool for evaluating DAT availability in NHPs following chronic cocaine administration.

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Source
http://dx.doi.org/10.1016/j.jneumeth.2024.110294DOI Listing

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