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A protocol for the detection of precision genome editing in human cells using One-pot DTECT. | LitMetric

A protocol for the detection of precision genome editing in human cells using One-pot DTECT.

STAR Protoc

The University of Calgary, Cumming School of Medicine, Department of Biochemistry and Molecular Biology, 3330 Hospital Drive N.W., Calgary, AB T2N 1N4, Canada; Robson DNA Science Centre, Calgary, AB, Canada; Arnie Charbonneau Cancer Institute, Calgary, AB, Canada. Electronic address:

Published: September 2024

Prime editing is a highly versatile CRISPR-based genome editing technology that allows for the precise installation of desired genetic variants. This protocol describes how to use One-pot DTECT to assess prime editing efficiency in human cells. Key steps include conducting prime editing, extracting genomic DNA, performing AcuI-tagging PCR, capturing genetic signatures, and detecting captured signatures through qualitative, quantitative, and visual methods. One-pot DTECT enables same-day detection of targeted genetic signatures introduced by precision genome editing technologies using off-the-shelf reagents. For complete details on the use and execution of this protocol, please refer to Baudrier et al..

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11422130PMC
http://dx.doi.org/10.1016/j.xpro.2024.103307DOI Listing

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