The semantic similarity between documents of a text corpus can be visualized using map-like metaphors based on twodimensional scatterplot layouts. These layouts result from a dimensionality reduction on the document-term matrix or a representation within a latent embedding, including topic models. Thereby, the resulting layout depends on the input data and hyperparameters of the dimensionality reduction and is therefore affected by changes in them. Furthermore, the resulting layout is affected by changes in the input data and hyperparameters of the dimensionality reduction. However, such changes to the layout require additional cognitive efforts from the user. In this work, we present a sensitivity study that analyzes the stability of these layouts concerning (1) changes in the text corpora, (2) changes in the hyperparameter, and (3) randomness in the initialization. Our approach has two stages: data measurement and data analysis. First, we derived layouts for the combination of three text corpora and six text embeddings and a grid-search-inspired hyperparameter selection of the dimensionality reductions. Afterward, we quantified the similarity of the layouts through ten metrics, concerning local and global structures and class separation. Second, we analyzed the resulting 42 817 tabular data points in a descriptive statistical analysis. From this, we derived guidelines for informed decisions on the layout algorithm and highlight specific hyperparameter settings. We provide our implementation as a Git repository at hpicgs/Topic-Models-and-DimensionalityReduction-Sensitivity-Study and results as Zenodo archive at DOI:10.5281/zenodo.12772898.
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http://dx.doi.org/10.1109/TVCG.2024.3456308 | DOI Listing |
Eye (Lond)
January 2025
Key Laboratory for Biomechanics and Mechanobiology of Ministry of Education, Beijing Advanced Innovation Center for Biomedical Engineering, Beihang University, Beijing, China.
Objectives: To use finite element (FE) modeling and in vivo optical coherence tomography (OCT) imaging to explore the effect of ciliary muscle traction on optic nerve head (ONH) deformation during accommodation.
Methods: We developed a FE model to mimic the ciliary muscle traction during accommodation, and varied the stiffness of the sclera, choroid, Bruch's membrane (BM), prelaminar neural tissue and lamina cribrosa (LC) to assess their effects on accommodation-induced ONH strains. To validate the FE model, OCT images of the right eyes' ONHs from 20 subjects (25 ± 1.
ChemSusChem
January 2025
Korea Institute of Energy Technology, Energy Engineering, 21 KENTECH-gil, 58330, Naju-si, KOREA, REPUBLIC OF.
Cu2O has attracted significant attention as a potential photocatalyst for CO2 reduction. However, its practical use is limited by rapid charge recombination, insufficient catalytic sites, and poor stability. In this study, we report a facile synthesis of Cu2O@BiOCl core-shell hybrids with well-defined shape of Cu2O and two-dimensional nanosheet structure of BiOCl.
View Article and Find Full Text PDFJ Orthop Surg Res
January 2025
Department of Orthopedics, Beijing Chaoyang Hospital, Capital Medical University, 8 Gongren Tiyuchang Nanlu, Chaoyang District, Beijing, 100020, China.
Background: Finite element analysis (FEA) could advance the understanding of fracture fixation and guide the choice of surgical treatment. This study aimed to compare two internal fixation methods in the treatment of displaced proximal humeral fracture (PHF) through FEA.
Methods: Three-dimensional FEA model based on the left shoulder joint of a 67-year-old female patient with PHFs and osteoporosis was adopted, in order to analyze the fixation effect and load stress distribution of internal fixation plates with open reduction and intramedullary nails without opening the fracture in the treatment of Neer III-VI PHF.
Phys Rev Lett
December 2024
Harish-Chandra Research Institute, A CI of Homi Bhabha National Institute, Chhatnag Road, Jhusi, Allahabad 211019, India.
Pump-probe response of the spin-orbit coupled Mott insulator Sr_{2}IrO_{4} reveals a rapid creation of low-energy optical weight and suppression of three-dimensional magnetic order on laser pumping. Postpump there is a quick reduction of the optical weight but a very slow recovery of the magnetic order-the difference is attributed to weak interlayer exchange in Sr_{2}IrO_{4} delaying the recovery of three-dimensional magnetic order. We suggest that the effect has a very different and more fundamental origin.
View Article and Find Full Text PDFAlzheimers Dement
December 2024
Queen Mary University of London, London, London, United Kingdom.
Background: Recent studies suggest the existence of distinct molecular subtypes within the AD patient cohort, characterized by distinct gene expression patterns in AD-relevant genes and pathways. Understanding these putative subtypes may prove pivotal to the greater understanding of AD pathology and developing targeted therapeutic interventions. This study aims to extend existing research by employing omics data modalities beyond gene expression, gathered from the ROSMAP and MSBB Alzheimer's studies.
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