Explainable artificial intelligence-driven prostate cancer screening using exosomal multi-marker based dual-gate FET biosensor.

Biosens Bioelectron

Center for Advanced Biomolecular Recognition, Biomedical Research Division, Korea Institute of Science and Technology, Seoul, 02792, Republic of Korea; KU-KIST Graduate School of Converging Science and Technology, Korea University, Seoul, 02481, Republic of Korea; Division of Bio-Medical Science and Technology, KIST School, University of Science and Technology (UST), Daejeon, 34113, Republic of Korea. Electronic address:

Published: January 2025

AI Article Synopsis

  • The Prostate Imaging Reporting and Data System (PI-RADS) is commonly used for diagnosing prostate cancer, but it struggles with PI-RADS 3 lesions, showing only 30-40% accuracy and a high false-positive rate.
  • Researchers propose a new explainable AI (XAI) system that uses a sensitive biosensor to identify ambiguous prostate cancer lesions by analyzing urinary exosomal biomarkers, demonstrating significantly higher accuracy.
  • The XAI system not only improved diagnosis accuracy for PI-RADS 3 lesions but also explained the reasoning behind its predictions, particularly highlighting the TMEM256 biomarker as a key factor in screening, thereby supporting better clinical decision-making.

Article Abstract

Prostate Imaging Reporting and Data System (PI-RADS) score, a reporting system of prostate MRI cases, has become a standard prostate cancer (PCa) screening method due to exceptional diagnosis performance. However, PI-RADS 3 lesions are an unmet medical need because PI-RADS provides diagnosis accuracy of only 30-40% at most, accompanied by a high false-positive rate. Here, we propose an explainable artificial intelligence (XAI) based PCa screening system integrating a highly sensitive dual-gate field-effect transistor (DGFET) based multi-marker biosensor for ambiguous lesions identification. This system produces interpretable results by analyzing sensing patterns of three urinary exosomal biomarkers, providing a possibility of an evidence-based prediction from clinicians. In our results, XAI-based PCa screening system showed a high accuracy with an AUC of 0.93 using 102 blinded samples with the non-invasive method. Remarkably, the PCa diagnosis accuracy of patients with PI-RADS 3 was more than twice that of conventional PI-RADS scoring. Our system also provided a reasonable explanation of its decision that TMEM256 biomarker is the leading factor for screening those with PI-RADS 3. Our study implies that XAI can facilitate informed decisions, guided by insights into the significance of visualized multi-biomarkers and clinical factors. The XAI-based sensor system can assist healthcare professionals in providing practical and evidence-based PCa diagnoses.

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Source
http://dx.doi.org/10.1016/j.bios.2024.116773DOI Listing

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