Improvement the thermostability and specific activity of acidic xylanase PjxA from Penicillium janthinellum via rigid flexible sites.

Int J Biol Macromol

Key Laboratory of Geriatric Nutrition and Health, Beijing Technology and Business University, Ministry of Education, Beijing 100048, China; Key Laboratory of Brewing Microbiome and Enzymatic Molecular Engineering, China General Chamber of Commerce, Beijing 100048, China; Beijing Advanced Innovation Center for Food Nutrition and Human Health, Beijing Technology and Business University (BTBU), Beijing 100048, China; Beijing Association for Science and Technology-Food Nutrition and Safety Professional Think Tank Base, Beijing 100048, China; School of Food and Health, Beijing Technology and Business University (BTBU), Beijing 100048, China. Electronic address:

Published: November 2024

AI Article Synopsis

  • Acidic xylanase PjxA from Penicillium janthinellum shows promise for biomass degradation but suffers from low thermal stability.
  • This study used computational simulations to identify flexible sites in PjxA, leading to the development of a more stable variant called PjxA-DS, which has a significantly longer half-life and higher enzyme activity.
  • The improved stability is attributed to the rigidification of flexible sites, increased positive charge, and enhanced hydrophilicity, making S82N and D45N potential targets for further enzyme stability modifications.

Article Abstract

Acidic xylanase PjxA from Penicillium janthinellum MA21601, with good eosinophilic and enzymatic activity, is an excellent candidate for xylan degradation to achieve effective utilization of biomass materials. However, the low thermal stability of PjxA has become a major bottleneck in its application. In this study, the flexible sites of PjxA were identified and rigidified through computational simulations of structure and sequence analysis combined with folding free energy calculations. Finally, a combined mutase PjxA-DS was constructed by rational integration of the two single mutants S82N and D45N. Compared to PjxA, PjxA-DS showed a 115.11-fold longer half-life at 50 °C and a 2.02-fold higher specific enzyme activity. Computer simulation analysis showed that S82N and D45N acted synergistically to improve the thermostability of PjxA. The stabilization of the N-terminus and the active center of PjxA, the increase in surface positive charge and hydrophilicity are the main reasons for the improved thermostability and catalytic activity of PjxA. Rigidification of the flexible site is an effective method for improving the thermostability of enzymes, S82N and D45N can be used as effective targets for the thermostability engineering modification of GH11 acidic xylanase.

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http://dx.doi.org/10.1016/j.ijbiomac.2024.135399DOI Listing

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