Sepia, a taxonomy oriented read classifier in Rust.

J Open Source Softw

Center for Food Safety, University of Georgia, Griffin, GA, USA.

Published: January 2021

Here we present Sepia, a fast and accurate read classifier. It is implemented in Rust, has the ability to switch between different taxonomies, can detect inconsistencies in taxonomies, and can estimate similarities between organisms in a query dataset and reference sequences in the index.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11373485PMC
http://dx.doi.org/10.21105/joss.03839DOI Listing

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